RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CD52P31358 61 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 GRIN1Q05586 938 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 GRB10Q13322 594 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 ODR4Q5SWX8 454 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 MCPH1Q8NEM0 835 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 PSPC1Q8WXF1 523 aaKnown RBP15.99■□□□□ 0.15
COL3A1-203ENST00000450867 PNMA5Q96PV4 448 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 OSMRQ99650 979 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 MTRQ99707 1265 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 FTHL17Q9BXU8 183 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 ERVK-5Q9HDB9 667 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 DDX19AQ9NUU7 478 aaKnown RBP15.99■□□□□ 0.15
COL3A1-203ENST00000450867 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
COL3A1-203ENST00000450867 COL4A3BPQ9Y5P4 624 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 MYO9BQ13459 2157 aa15.99■□□□□ 0.15
COL3A1-203ENST00000450867 TMEM265A0A087WTH1 108 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.98■□□□□ 0.15
COL3A1-203ENST00000450867 ZBBXA8MT70 800 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 RPS6KA5O75582 802 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 ATP2A2P16615 1042 aaKnown RBP15.98■□□□□ 0.15
COL3A1-203ENST00000450867 ARL2P36404 184 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 KCNJ6P48051 423 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 PAK2Q13177 524 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 MXD4Q14582 209 aaPredicted RBP15.98■□□□□ 0.15
COL3A1-203ENST00000450867 FAM228AQ86W67 206 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
COL3A1-203ENST00000450867 PRPF31Q8WWY3 499 aaKnown RBP15.98■□□□□ 0.15
COL3A1-203ENST00000450867 CCDC43Q96MW1 224 aaKnown RBP15.98■□□□□ 0.15
COL3A1-203ENST00000450867 CCSER1Q9C0I3 900 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 CHD7Q9P2D1 2997 aa15.98■□□□□ 0.15
COL3A1-203ENST00000450867 FNDC1Q4ZHG4 1894 aaPredicted RBP15.97■□□□□ 0.15
COL3A1-203ENST00000450867 A0A087WWV3 80 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 GPR182O15218 404 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 PPP6R2O75170 966 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 CYP11B2P19099 503 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 DEFB103AP81534 67 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 LAMTOR4Q0VGL1 99 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 PADI6Q6TGC4 694 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 KCNK18Q7Z418 384 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 CABP7Q86V35 215 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 RHPN2Q8IUC4 686 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 HERC6Q8IVU3 1022 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 CRIPAKQ8N1N5 446 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 LINC01599Q8WXQ3 324 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 TMEM143Q96AN5 459 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 LRCH3Q96II8 777 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 NFKBIZQ9BYH8 718 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 CSRNP2Q9H175 543 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
COL3A1-203ENST00000450867 BHMT2Q9H2M3 363 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 TMX1Q9H3N1 280 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 IFT122Q9HBG6 1241 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 DNM3Q9UQ16 869 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 PCDHA11Q9Y5I1 949 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 RALGAPA2Q2PPJ7 1873 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 NLRC5Q86WI3 1866 aa15.97■□□□□ 0.15
COL3A1-203ENST00000450867 A0A087WZ62 844 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 ARHGEF35A5YM69 484 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 E9PMD0 336 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 USO1O60763 962 aaKnown RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 GJB5O95377 273 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 MARCKSP29966 332 aaPredicted RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 UBA7P41226 1012 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 DSC3Q14574 896 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 RAB30Q15771 203 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 RTN4RL1Q86UN2 441 aaPredicted RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 KRI1Q8N9T8 703 aaKnown RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 NLRP7Q8WX94 980 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 FDXACB1Q9BRP7 624 aaPredicted RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 PBX4Q9BYU1 374 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 GCOM2Q9BZD3 368 aaPredicted RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 INO80BQ9C086 356 aaPredicted RBP15.96■□□□□ 0.15
COL3A1-203ENST00000450867 ST3GAL5Q9UNP4 418 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 GINS2Q9Y248 185 aa15.96■□□□□ 0.15
COL3A1-203ENST00000450867 GRXCR1A8MXD5 290 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 RBAK-RBAKDNI3L0D1 243 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 ENPP3O14638 875 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 SPTLC2O15270 562 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 AMHP03971 560 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 DNAJB2P25686 324 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 HTRA4P83105 476 aaPredicted RBP15.95■□□□□ 0.14
COL3A1-203ENST00000450867 STK38Q15208 465 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 PCBP1Q15365 356 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL3A1-203ENST00000450867 FOXD4L5Q5VV16 416 aaPredicted RBP15.95■□□□□ 0.14
COL3A1-203ENST00000450867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL3A1-203ENST00000450867 SRGAP1Q7Z6B7 1085 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 KSR1Q8IVT5 923 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 ASAP3Q8TDY4 903 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 LRRC15Q8TF66 581 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 FOXD4L4Q8WXT5 416 aaPredicted RBP15.95■□□□□ 0.14
COL3A1-203ENST00000450867 TOP1MTQ969P6 601 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 CALML4Q96GE6 196 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 PPP1R16BQ96T49 567 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 BMP2KQ9NSY1 1161 aaPredicted RBP15.95■□□□□ 0.14
COL3A1-203ENST00000450867 KCND2Q9NZV8 630 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 TFIP11Q9UBB9 837 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms