RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 LONP2Q86WA8 852 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 SLC15A3Q8IY34 581 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 ZNF579Q8NAF0 562 aaKnown RBP8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 NSUN4Q96CB9 384 aaKnown RBP8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 DYNLL2Q96FJ2 89 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 CLMNQ96JQ2 1002 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 GPCPD1Q9NPB8 672 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 TBC1D7Q9P0N9 293 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 CAPN6Q9Y6Q1 641 aa8.1□□□□□ -1.11
TRIM49C-201ENST00000448984 PNPLA7Q6ZV29 1317 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 CACNA1SQ13698 1873 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 ATP9BO43861 1147 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 RAD21O60216 631 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 KRT38O76015 456 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 GNA14O95837 355 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 CHN1P15882 459 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 HOXD12P35452 270 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 PTDSS1P48651 473 aaKnown RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 PLOD1Q02809 727 aaPredicted RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 RCN2Q14257 317 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 KRT71Q3SY84 523 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 SLC44A4Q53GD3 710 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 EARS2Q5JPH6 523 aaKnown RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 RASIP1Q5U651 963 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 TPTE2Q6XPS3 522 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 ZNF654Q8IZM8 581 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 LSM14AQ8ND56 463 aaKnown RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 GATA6Q92908 595 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 ABHD8Q96I13 439 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 TMEM237Q96Q45 408 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 GSDMAQ96QA5 445 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 UBAC1Q9BSL1 405 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 LRMDAQ9H2I8 198 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 CROTQ9UKG9 612 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 INTUQ9ULD6 942 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 ZMYND8Q9ULU4 1186 aaPredicted RBP8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
TRIM49C-201ENST00000448984 ESYT3A0FGR9 886 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 SIGLEC16A6NMB1 481 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 ECE2O60344 883 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TRPC1P48995 793 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 SPA17Q15506 151 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TCP11X2Q5H9J9 407 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 SLC10A5Q5PT55 438 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 CROCCP2Q86T23 111 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 EXOC8Q8IYI6 725 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 NME8Q8N427 588 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 KIF2BQ8N4N8 673 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 DHTKD1Q96HY7 919 aaPredicted RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 NRDE2Q9H7Z3 1164 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 NHEJ1Q9H9Q4 299 aaPredicted RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 NMRK1Q9NWW6 199 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 SAP30BPQ9UHR5 308 aaKnown RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 RWDD2AQ9UIY3 292 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TBC1D30Q9Y2I9 924 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TMEM247A6NEH6 219 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 ZSCAN5CA6NGD5 496 aaPredicted RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 LGALS16A8MUM7 142 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 KCNJ18B7U540 433 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 PPP1R3GB7ZBB8 358 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 RGL2O15211 777 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 POLR2DO15514 142 aaKnown RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 ATP9AO75110 1047 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 UNC5CO95185 931 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 CPA3P15088 417 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 CD44P16070 742 aaKnown RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 ECHS1P30084 290 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 LIFRP42702 1097 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 ACADVLP49748 655 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 TOB1P50616 345 aaPredicted RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 STX17P56962 302 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 UBXN1Q04323 297 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 KCNJ12Q14500 433 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 SEC23AQ15436 765 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 ADRM1Q16186 407 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 P3H1Q32P28 736 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 DIS3L2Q8IYB7 885 aaKnown RBP8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 GRAMD1CQ8IYS0 662 aa8.08□□□□□ -1.12
TRIM49C-201ENST00000448984 FANCBQ8NB91 859 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms