RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
USP39-206ENST00000448971 XKR3Q5GH77 459 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 FAM26DQ5JW98 314 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 IER5Q5VY09 327 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 TMEM192Q8IY95 271 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 SEPT8Q92599 483 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 KAT6AQ92794 2004 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 MAP7D2Q96T17 732 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 GINS2Q9Y248 185 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 TMEM150BA6NC51 233 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 POTEMA6NI47 508 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 H3BQ06 376 aaPredicted RBP16.31■□□□□ 0.2
USP39-206ENST00000448971 UPP2O95045 317 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 CHRNA1P02708 482 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 P4HBP07237 508 aaKnown RBP16.31■□□□□ 0.2
USP39-206ENST00000448971 ALADP13716 330 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 CLCN3P51790 818 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
USP39-206ENST00000448971 DYDC2Q96IM9 177 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 MTMR9Q96QG7 549 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 PPP1R16BQ96T49 567 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
USP39-206ENST00000448971 IFIH1Q9BYX4 1025 aaKnown RBP16.31■□□□□ 0.2
USP39-206ENST00000448971 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
USP39-206ENST00000448971 DDX11L8A8MPP1 907 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 MAGEB2O15479 319 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 LINC00271P0C7V0 271 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 PDCP20941 246 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 TMOD1P28289 359 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 SSTR3P32745 418 aaPredicted RBP16.3■□□□□ 0.2
USP39-206ENST00000448971 CTTNQ14247 550 aaKnown RBP16.3■□□□□ 0.2
USP39-206ENST00000448971 TIGD5Q53EQ6 642 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 PLA2G4FQ68DD2 849 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 LRRC71Q8N4P6 559 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 APBB2Q92870 758 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
USP39-206ENST00000448971 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 AKT3Q9Y243 479 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 NLRC5Q86WI3 1866 aa16.3■□□□□ 0.2
USP39-206ENST00000448971 ZNF318Q5VUA4 2279 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
USP39-206ENST00000448971 LTBRP36941 435 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 LPIN1Q14693 890 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 RILPL1Q5EBL4 403 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 TPH2Q8IWU9 490 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 NME8Q8N427 588 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 INTS4Q96HW7 963 aaKnown RBP16.29■□□□□ 0.2
USP39-206ENST00000448971 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
USP39-206ENST00000448971 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
USP39-206ENST00000448971 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
USP39-206ENST00000448971 ZSWIM4Q9H7M6 989 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 PCDHB6Q9Y5E3 794 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 COL4A6Q14031 1691 aa16.29■□□□□ 0.2
USP39-206ENST00000448971 TTC3P53804 2025 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 C5orf67F2Z3F1 127 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 VTNP04004 478 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 YWHABP31946 246 aaKnown RBP16.28■□□□□ 0.2
USP39-206ENST00000448971 TECP42680 631 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 ZP2Q05996 745 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 PAK2Q13177 524 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 CTC1Q2NKJ3 1217 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 ANO5Q75V66 913 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 SNX21Q969T3 373 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
USP39-206ENST00000448971 NIFKQ9BYG3 293 aaKnown RBP16.28■□□□□ 0.2
USP39-206ENST00000448971 WRAP73Q9P2S5 460 aaPredicted RBP16.28■□□□□ 0.2
USP39-206ENST00000448971 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 KDM3AQ9Y4C1 1321 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 CD52P31358 61 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 TOB1P50616 345 aaPredicted RBP16.27■□□□□ 0.2
USP39-206ENST00000448971 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.2
USP39-206ENST00000448971 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
USP39-206ENST00000448971 KIZQ2M2Z5 673 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 HAUS3Q68CZ6 603 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 ALYREFQ86V81 257 aaKnown RBP16.27■□□□□ 0.2
USP39-206ENST00000448971 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 OSMRQ99650 979 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 JPH2Q9BR39 696 aaPredicted RBP16.27■□□□□ 0.2
USP39-206ENST00000448971 CYP26B1Q9NR63 512 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
USP39-206ENST00000448971 PRKAG3Q9UGI9 489 aa16.27■□□□□ 0.2
USP39-206ENST00000448971 RALGAPA2Q2PPJ7 1873 aa16.27■□□□□ 0.19
USP39-206ENST00000448971 LAD1O00515 517 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 DCXO43602 365 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 STBD1O95210 358 aa16.26■□□□□ 0.19
USP39-206ENST00000448971 RB1P06400 928 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms