RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 CHMP4BQ9H444 224 aaKnown RBP8.36□□□□□ -1.07
LINC00349-201ENST00000448748 NSUN3Q9H649 340 aaKnown RBP8.36□□□□□ -1.07
LINC00349-201ENST00000448748 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
LINC00349-201ENST00000448748 GP6Q9HCN6 339 aa8.36□□□□□ -1.07
LINC00349-201ENST00000448748 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
LINC00349-201ENST00000448748 HMG20BQ9P0W2 317 aa8.36□□□□□ -1.07
LINC00349-201ENST00000448748 ZNF451Q9Y4E5 1061 aa8.36□□□□□ -1.07
LINC00349-201ENST00000448748 COL2A1P02458 1487 aaPredicted RBP8.36□□□□□ -1.07
LINC00349-201ENST00000448748 WDR33Q9C0J8 1336 aaKnown RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 NOTOA8MTQ0 251 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 SURF6O75683 361 aaKnown RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 EFEMP2O95967 443 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 CD247P20963 164 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 GALK1P51570 392 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 ZNF445P59923 1031 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 ZNF124Q15973 351 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 FAM83AQ86UY5 434 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 ERC1Q8IUD2 1116 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 ZGPATQ8N5A5 531 aaKnown RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 C19orf47Q8N9M1 422 aaKnown RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 BRF1Q92994 677 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 EAF2Q96CJ1 260 aaPredicted RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 FAM84AQ96KN4 292 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 CAPNS2Q96L46 248 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 KCNK12Q9HB15 430 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 ZNF70Q9UC06 446 aaPredicted RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 GPR160Q9UJ42 338 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 ABT1Q9ULW3 272 aaKnown RBP8.35□□□□□ -1.07
LINC00349-201ENST00000448748 PCDHB10Q9UN67 800 aa8.35□□□□□ -1.07
LINC00349-201ENST00000448748 PHIPQ8WWQ0 1821 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 MYO1BO43795 1136 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 ZNF205O95201 554 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 GSNP06396 782 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 VAV1P15498 845 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 MAP2K2P36507 400 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 HUNKP57058 714 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 TNFAIP1Q13829 316 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 GNPTABQ3T906 1256 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 HSP90AB4PQ58FF6 505 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 NOL9Q5SY16 702 aaKnown RBP8.34□□□□□ -1.07
LINC00349-201ENST00000448748 CYP4F22Q6NT55 531 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 KSR1Q8IVT5 923 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 FAM169BQ8N8A8 192 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 SHISA4Q96DD7 197 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 SCAF8Q9UPN6 1271 aaKnown RBP8.34□□□□□ -1.07
LINC00349-201ENST00000448748 EXOC6BQ9Y2D4 811 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 SLC12A7Q9Y666 1083 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 MKI67P46013 3256 aaKnown RBP8.34□□□□□ -1.07
LINC00349-201ENST00000448748 PTPRFP10586 1907 aa8.34□□□□□ -1.07
LINC00349-201ENST00000448748 MROH7-TTC4A0A0A0MT08 1334 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 CLRN2A0PK11 232 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 H0Y8X5 98 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 CBFA2T2O43439 604 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 HMMRO75330 724 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 FRAT2O75474 233 aaPredicted RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 ATF4P18848 351 aaPredicted RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 ECE1P42892 770 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 KIR2DL1P43626 348 aaPredicted RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 KIR2DL2P43627 348 aaPredicted RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 RASA3Q14644 834 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 PPP2R5EQ16537 467 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 CEP128Q6ZU80 1094 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 RASAL3Q86YV0 1011 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 KRTAP1-3Q8IUG1 177 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 C2orf69Q8N8R5 385 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 KIF1BPQ96EK5 621 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 FCRL2Q96LA5 508 aaPredicted RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 SLC38A3Q99624 504 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 CDADC1Q9BWV3 514 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 IDI2Q9BXS1 227 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 TDRD3Q9H7E2 651 aaKnown RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
LINC00349-201ENST00000448748 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
LINC00349-201ENST00000448748 DOCK1Q14185 1865 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 GPR75-ASB3A0A0A6YYF3 556 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 RHBDL3P58872 404 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 MECOMQ03112 1051 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 NOGQ13253 232 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 SNX17Q15036 470 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 RTP2Q5QGT7 225 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 PRAMEF18Q5VWM3 479 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 TMED8Q6PL24 325 aaPredicted RBP8.32□□□□□ -1.08
LINC00349-201ENST00000448748 FIBCD1Q8N539 461 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00349-201ENST00000448748 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 NEUROD6Q96NK8 337 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 HAUS7Q99871 368 aa8.32□□□□□ -1.08
LINC00349-201ENST00000448748 DCTPP1Q9H773 170 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms