RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 TRAF5O00463 557 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 EPS15P42566 896 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 LONRF1Q17RB8 773 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ZDHHC24Q6UX98 284 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC55Q6ZSA7 311 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 JAMLQ86YT9 394 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 INPP5DQ92835 1189 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 PTPRN2Q92932 1015 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 TIPINQ9BVW5 301 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 PITPNM3Q9BZ71 974 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 DENND2DQ9H6A0 471 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 KANSL2Q9H9L4 492 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 COL4A3BPQ9Y5P4 624 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 KIAA0391O15091 583 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 CYP27B1O15528 508 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 RIPK2O43353 540 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 RASA1P20936 1047 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ABCD1P33897 745 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 RASSF2P50749 326 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 MCL1Q07820 350 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC41Q15345 812 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 PFKFB3Q16875 520 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 PABPC1LQ4VXU2 614 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 SNX30Q5VWJ9 437 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 NT5DC3Q86UY8 548 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ARHGAP18Q8N392 663 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM89AQ96GI7 184 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 PDP2Q9P2J9 529 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 NAGPAQ9UK23 515 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 TJP3O95049 919 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 LMNB2Q03252 620 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 TNFAIP8L3Q5GJ75 292 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM47EQ6ZV65 393 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 SV2BQ7L1I2 683 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ZNF571Q7Z3V5 609 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 SCG3Q8WXD2 468 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 GRAMD1AQ96CP6 724 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC37BQ96QE4 947 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 GH1P01241 217 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 KIAA0825Q8IV33 1275 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 SPATA5Q8NB90 893 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 MMTAG2Q9BU76 263 aaKnown RBP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 KIAA1683Q9H0B3 1180 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 SEC63Q9UGP8 760 aaKnown RBP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 USP20Q9Y2K6 914 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 STXBP5LQ9Y2K9 1186 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 PCDH11XQ9BZA7 1347 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 SMIM22K7EJ46 135 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 ATP6V1G1O75348 118 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 H2AFZP0C0S5 128 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 PHKG2P15735 406 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 ACVR2BQ13705 512 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 DHX34Q14147 1143 aaKnown RBP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 MTFR1Q15390 333 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 MFSD5Q6N075 450 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 CGB2Q6NT52 195 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 VSTM1Q6UX27 236 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 H2AFVQ71UI9 128 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 CALML4Q96GE6 196 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 ROPN1BQ9BZX4 212 aaPredicted RBP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 ROPN1Q9HAT0 212 aaPredicted RBP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 PICK1Q9NRD5 415 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 ATP8A2Q9NTI2 1148 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 CCDC87Q9NVE4 849 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 INTUQ9ULD6 942 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 TMCO1Q9UM00 188 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 FLT1P17948 1338 aa10.15□□□□□ -0.78
SYNPO2-204ENST00000448416 DDAH1O94760 285 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 ATP5DP30049 168 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 FKBP3Q00688 224 aaKnown RBP10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 UNC13DQ70J99 1090 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 ZNF365Q70YC5 407 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 SLFN11Q7Z7L1 901 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 PPFIBP2Q8ND30 876 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 SDR42E1Q8WUS8 393 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 RBM17Q96I25 401 aaKnown RBP10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 AK8Q96MA6 479 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 CARD9Q9H257 536 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 ARMCX3Q9UH62 379 aaPredicted RBP10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 PCDHA4Q9UN74 947 aa10.15□□□□□ -0.79
SYNPO2-204ENST00000448416 MAPK13O15264 365 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 BRAFP15056 766 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 POLGP54098 1239 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 DRG2P55039 364 aaKnown RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 MAPK7Q13164 816 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 CNPY1Q3B7I2 92 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 SH3TC2Q8TF17 1288 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 HES6Q96HZ4 224 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 RUNDC3BQ96NL0 473 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 ERVK-5Q9HDB9 667 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 USP40Q9NVE5 1235 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 PARP2Q9UGN5 583 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 ZNF232Q9UNY5 417 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 RTCBQ9Y3I0 505 aaKnown RBP10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 PFDN1O60925 122 aa10.14□□□□□ -0.79
SYNPO2-204ENST00000448416 PENKP01210 267 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms