RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 EIF4BP23588 611 aaKnown RBP27.89■■■□□ 2.06
UFD1-204ENST00000447868 HTRA4P83105 476 aaPredicted RBP27.89■■■□□ 2.06
UFD1-204ENST00000447868 FERMT3Q86UX7 667 aa27.89■■■□□ 2.06
UFD1-204ENST00000447868 KSR1Q8IVT5 923 aa27.89■■■□□ 2.06
UFD1-204ENST00000447868 EXOC8Q8IYI6 725 aa27.89■■■□□ 2.06
UFD1-204ENST00000447868 POLR3CQ9BUI4 534 aaPredicted RBP27.89■■■□□ 2.06
UFD1-204ENST00000447868 TSPYL2Q9H2G4 693 aaPredicted RBP27.89■■■□□ 2.06
UFD1-204ENST00000447868 ANKEF1Q9NU02 776 aa27.89■■■□□ 2.06
UFD1-204ENST00000447868 LRWD1Q9UFC0 647 aa27.89■■■□□ 2.06
UFD1-204ENST00000447868 LAD1O00515 517 aa27.88■■■□□ 2.05
UFD1-204ENST00000447868 MGEA5O60502 916 aa27.88■■■□□ 2.05
UFD1-204ENST00000447868 HSCBQ8IWL3 235 aa27.88■■■□□ 2.05
UFD1-204ENST00000447868 ARNTL2Q8WYA1 636 aa27.88■■■□□ 2.05
UFD1-204ENST00000447868 NLRP4Q96MN2 994 aa27.88■■■□□ 2.05
UFD1-204ENST00000447868 TTC3P53804 2025 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 A0A087WZ62 844 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 DENND3A2RUS2 1198 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 CSDE1O75534 798 aaKnown RBP27.87■■■□□ 2.05
UFD1-204ENST00000447868 DARSP14868 501 aaKnown RBP27.87■■■□□ 2.05
UFD1-204ENST00000447868 FGFR4P22455 802 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 CDC42EP1Q00587 391 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 POTEGQ6S5H5 508 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 GAS2L1Q99501 681 aaPredicted RBP27.87■■■□□ 2.05
UFD1-204ENST00000447868 MTRQ99707 1265 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 ADAM2Q99965 735 aa27.87■■■□□ 2.05
UFD1-204ENST00000447868 FDXACB1Q9BRP7 624 aaPredicted RBP27.87■■■□□ 2.05
UFD1-204ENST00000447868 GCOM2Q9BZD3 368 aaPredicted RBP27.87■■■□□ 2.05
UFD1-204ENST00000447868 LINC01553A4QN01 128 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 RFXAPO00287 272 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 SYT1P21579 422 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 RPA1P27694 616 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 CCT6AP40227 531 aaKnown RBP27.86■■■□□ 2.05
UFD1-204ENST00000447868 RARRES1P49788 294 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 IL17AQ16552 155 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 HAUS3Q68CZ6 603 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 DTHD1Q6ZMT9 781 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 BRAPQ7Z569 592 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 PSPC1Q8WXF1 523 aaKnown RBP27.86■■■□□ 2.05
UFD1-204ENST00000447868 RAB34Q9BZG1 259 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 MTUS1Q9ULD2 1270 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 COL4A3BPQ9Y5P4 624 aa27.86■■■□□ 2.05
UFD1-204ENST00000447868 EPOPA6NHQ4 379 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 PRPHP41219 470 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 ATP2C1P98194 919 aaPredicted RBP27.85■■■□□ 2.05
UFD1-204ENST00000447868 PDIA5Q14554 519 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 ZNF410Q86VK4 478 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 TCP11Q8WWU5 503 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 PRPF31Q8WWY3 499 aaKnown RBP27.85■■■□□ 2.05
UFD1-204ENST00000447868 NACC1Q96RE7 527 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 ATP6V0A4Q9HBG4 840 aa27.85■■■□□ 2.05
UFD1-204ENST00000447868 GAS2O43903 313 aaKnown RBP27.84■■■□□ 2.05
UFD1-204ENST00000447868 XRCC6P12956 609 aaKnown RBP eCLIP27.84■■■□□ 2.05
UFD1-204ENST00000447868 IGFBP4P22692 258 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 NPAS4Q8IUM7 802 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 IGSF22Q8N9C0 903 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 SP7Q8TDD2 431 aaPredicted RBP27.84■■■□□ 2.05
UFD1-204ENST00000447868 TGS1Q96RS0 853 aaKnown RBP27.84■■■□□ 2.05
UFD1-204ENST00000447868 XPNPEP1Q9NQW7 623 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 RGS18Q9NS28 235 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 LRFN2Q9ULH4 789 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 CHD7Q9P2D1 2997 aa27.84■■■□□ 2.05
UFD1-204ENST00000447868 PP2D1A8MPX8 630 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 USO1O60763 962 aaKnown RBP27.83■■■□□ 2.05
UFD1-204ENST00000447868 DGAT1O75907 488 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 SRGAP2CP0DJJ0 459 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 SARSP49591 514 aaKnown RBP27.83■■■□□ 2.05
UFD1-204ENST00000447868 LAMTOR4Q0VGL1 99 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 ADGRE1Q14246 886 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 ECM1Q16610 540 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 SNX29Q8TEQ0 813 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 C1orf112Q9NSG2 853 aa27.83■■■□□ 2.05
UFD1-204ENST00000447868 STAG3L1P0CL83 205 aa27.82■■■□□ 2.04
UFD1-204ENST00000447868 DSC3Q14574 896 aa27.82■■■□□ 2.04
UFD1-204ENST00000447868 SLC24A5Q71RS6 500 aa27.82■■■□□ 2.04
UFD1-204ENST00000447868 MAFAQ8NHW3 353 aaPredicted RBP27.82■■■□□ 2.04
UFD1-204ENST00000447868 C17orf80Q9BSJ5 609 aa27.82■■■□□ 2.04
UFD1-204ENST00000447868 DBR1Q9UK59 544 aaKnown RBP27.82■■■□□ 2.04
UFD1-204ENST00000447868 PCDHB7Q9Y5E2 793 aa27.82■■■□□ 2.04
UFD1-204ENST00000447868 COL6A3P12111 3177 aa27.82■■■□□ 2.04
UFD1-204ENST00000447868 DGKIO75912 1065 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 ZSCAN20P17040 1043 aaPredicted RBP27.81■■■□□ 2.04
UFD1-204ENST00000447868 SFPQP23246 707 aaKnown RBP eCLIP27.81■■■□□ 2.04
UFD1-204ENST00000447868 CDC25AP30304 524 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 ERVK-21P61565 698 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 KRT79Q5XKE5 535 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 FAM43BQ6ZT52 329 aaPredicted RBP27.81■■■□□ 2.04
UFD1-204ENST00000447868 MAEAQ7L5Y9 396 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 CRIPAKQ8N1N5 446 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 INO80BQ9C086 356 aaPredicted RBP27.81■■■□□ 2.04
UFD1-204ENST00000447868 IFT122Q9HBG6 1241 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 KIAA1024Q9UPX6 916 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 STK24Q9Y6E0 443 aa27.81■■■□□ 2.04
UFD1-204ENST00000447868 VWA3AA6NCI4 1184 aa27.8■■■□□ 2.04
UFD1-204ENST00000447868 C9IYK1 514 aa27.8■■■□□ 2.04
UFD1-204ENST00000447868 HSP90AA1P07900 732 aaKnown RBP27.8■■■□□ 2.04
UFD1-204ENST00000447868 FIBCD1Q8N539 461 aa27.8■■■□□ 2.04
UFD1-204ENST00000447868 RNF149Q8NC42 400 aa27.8■■■□□ 2.04
UFD1-204ENST00000447868 RC3H2Q9HBD1 1191 aaKnown RBP27.8■■■□□ 2.04
UFD1-204ENST00000447868 ADGRA3Q8IWK6 1321 aa27.8■■■□□ 2.04
UFD1-204ENST00000447868 ARHGEF35A5YM69 484 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms