RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 RLFQ13129 1914 aa17.77■□□□□ 0.44
OTUB1-204ENST00000447683 H3BQF6 201 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.43
OTUB1-204ENST00000447683 FDX1P10109 184 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 RPS6P62753 249 aaKnown RBP17.77■□□□□ 0.43
OTUB1-204ENST00000447683 MTMR1Q13613 665 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 ALCAMQ13740 583 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 PGM5Q15124 567 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 TMEM174Q8WUU8 243 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 NAGPAQ9UK23 515 aa17.77■□□□□ 0.43
OTUB1-204ENST00000447683 POLR3GO15318 223 aaPredicted RBP17.76■□□□□ 0.43
OTUB1-204ENST00000447683 CXCR5P32302 372 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 QARSP47897 775 aaKnown RBP17.76■□□□□ 0.43
OTUB1-204ENST00000447683 RARRES1P49788 294 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 GPS2Q13227 327 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 MTMR2Q13614 643 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 CNPY4Q8N129 248 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 PDE11AQ9HCR9 933 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 ZCCHC17Q9NP64 241 aaKnown RBP17.76■□□□□ 0.43
OTUB1-204ENST00000447683 LARSQ9P2J5 1176 aaKnown RBP17.76■□□□□ 0.43
OTUB1-204ENST00000447683 PAFAH1B1P43034 410 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 MEI1Q5TIA1 1274 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 CCDC70Q6NSX1 233 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 CCNI2Q6ZMN8 369 aaPredicted RBP17.76■□□□□ 0.43
OTUB1-204ENST00000447683 RPAP3Q9H6T3 665 aaPredicted RBP17.76■□□□□ 0.43
OTUB1-204ENST00000447683 VIPAS39Q9H9C1 493 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
OTUB1-204ENST00000447683 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
OTUB1-204ENST00000447683 ASTN2O75129 1339 aaPredicted RBP17.75■□□□□ 0.43
OTUB1-204ENST00000447683 LRRIQ3A6PVS8 624 aaPredicted RBP17.75■□□□□ 0.43
OTUB1-204ENST00000447683 ZBED4O75132 1171 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 FERP16591 822 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 CYP2J2P51589 502 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 SPP2Q13103 211 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 CCDC181Q5TID7 509 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 ALKBH5Q6P6C2 394 aaKnown RBP17.75■□□□□ 0.43
OTUB1-204ENST00000447683 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 MICALL2Q8IY33 904 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 PSMB7Q99436 277 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 HACL1Q9UJ83 578 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 DAAM1Q9Y4D1 1078 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 GRID2IPA4D2P6 1211 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 GFPT2O94808 682 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 EIF2AK2P19525 551 aaKnown RBP17.75■□□□□ 0.43
OTUB1-204ENST00000447683 STAT1P42224 750 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 SAMD7Q7Z3H4 446 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 C12orf56Q8IXR9 622 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 STK33Q9BYT3 514 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 TMEM206Q9H813 350 aa17.75■□□□□ 0.43
OTUB1-204ENST00000447683 K7ENM7 598 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 GMPSP49915 693 aaPredicted RBP17.74■□□□□ 0.43
OTUB1-204ENST00000447683 CBWD6Q4V339 395 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 CBWD3Q5JTY5 395 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 CBWD5Q5RIA9 395 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 C4orf19Q8IY42 314 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 SYCP3Q8IZU3 236 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 LRRC1Q9BTT6 524 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 PXMP2Q9NR77 195 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 ZNF112Q9UJU3 913 aa17.74■□□□□ 0.43
OTUB1-204ENST00000447683 VWA5AO00534 786 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 PLS3P13797 630 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 NOP2P46087 812 aaKnown RBP17.73■□□□□ 0.43
OTUB1-204ENST00000447683 BFSP1Q12934 665 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 CFAP221Q4G0U5 840 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 NBPF12Q5TAG4 269 aaPredicted RBP17.73■□□□□ 0.43
OTUB1-204ENST00000447683 RNF207Q6ZRF8 634 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 VPS36Q86VN1 386 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 RMDN3Q96TC7 470 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 TIPINQ9BVW5 301 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 RASSF4Q9H2L5 321 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 ST6GALNAC4Q9H4F1 302 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 EHD2Q9NZN4 543 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 INTUQ9ULD6 942 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 SAMM50Q9Y512 469 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 KIAA1217Q5T5P2 1943 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 LTBP3Q9NS15 1303 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 F8VZ95 297 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 DDX3XO00571 662 aaKnown RBP eCLIP17.73■□□□□ 0.431e-11■■■■□ 22.1
OTUB1-204ENST00000447683 EXOC3O60645 756 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 FTCDO95954 541 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 YWHABP31946 246 aaKnown RBP17.73■□□□□ 0.43
OTUB1-204ENST00000447683 SOX5P35711 763 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 OLIG1Q8TAK6 271 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 SMARCAL1Q9NZC9 954 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 CNOT7Q9UIV1 285 aaKnown RBP17.73■□□□□ 0.43
OTUB1-204ENST00000447683 CTDP1Q9Y5B0 961 aaPredicted RBP17.73■□□□□ 0.43
OTUB1-204ENST00000447683 PHIPQ8WWQ0 1821 aa17.73■□□□□ 0.43
OTUB1-204ENST00000447683 ZMYND10O75800 440 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 ZBTB7AO95365 584 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 TRIM49P0CI25 452 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 TRIM49CP0CI26 452 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 MYBL2P10244 700 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 JAK3P52333 1124 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 BACE1P56817 501 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 TBC1D10BQ4KMP7 808 aaPredicted RBP17.72■□□□□ 0.43
OTUB1-204ENST00000447683 DCAF15Q66K64 600 aa17.72■□□□□ 0.43
OTUB1-204ENST00000447683 XRRA1Q6P2D8 792 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms