RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 RCOR1Q9UKL0 485 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 GHRP10912 638 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 CYP11B2P19099 503 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 DNM1Q05193 864 aaKnown RBP24.45■■□□□ 1.5
APOE-204ENST00000446996 POU5F1BQ06416 359 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 DRP2Q13474 957 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 MXD4Q14582 209 aaPredicted RBP24.45■■□□□ 1.5
APOE-204ENST00000446996 PADI6Q6TGC4 694 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 OTOP2Q7RTS6 562 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 IFIH1Q9BYX4 1025 aaKnown RBP24.45■■□□□ 1.5
APOE-204ENST00000446996 BHMT2Q9H2M3 363 aa24.45■■□□□ 1.5
APOE-204ENST00000446996 CIZ1Q9ULV3 898 aaPredicted RBP24.45■■□□□ 1.5
APOE-204ENST00000446996 MICAL3Q7RTP6 2002 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 TCHHQ07283 1943 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 A0A087WWV3 80 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 FXR1P51114 621 aaKnown RBP eCLIP24.44■■□□□ 1.5
APOE-204ENST00000446996 KRT85P78386 507 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 KIZQ2M2Z5 673 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 PHOSPHO2Q8TCD6 241 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 FTHL17Q9BXU8 183 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 INO80BQ9C086 356 aaPredicted RBP24.44■■□□□ 1.5
APOE-204ENST00000446996 CDHR5Q9HBB8 845 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 CCDC39Q9UFE4 941 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 COL4A3BPQ9Y5P4 624 aa24.44■■□□□ 1.5
APOE-204ENST00000446996 E9PMD0 336 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 GPR182O15218 404 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 CUTAO60888 179 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 EIF4BP23588 611 aaKnown RBP24.43■■□□□ 1.5
APOE-204ENST00000446996 ARL2P36404 184 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 TXLNAP40222 546 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 RHPN2Q8IUC4 686 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 PRPF31Q8WWY3 499 aaKnown RBP24.43■■□□□ 1.5
APOE-204ENST00000446996 TMEM143Q96AN5 459 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 CLIC6Q96NY7 704 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 OSMRQ99650 979 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 GCOM2Q9BZD3 368 aaPredicted RBP24.43■■□□□ 1.5
APOE-204ENST00000446996 OSBPL7Q9BZF2 842 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 AGO3Q9H9G7 860 aaKnown RBP24.43■■□□□ 1.5
APOE-204ENST00000446996 KCND2Q9NZV8 630 aa24.43■■□□□ 1.5
APOE-204ENST00000446996 USO1O60763 962 aaKnown RBP24.42■■□□□ 1.5
APOE-204ENST00000446996 RPS6KA5O75582 802 aa24.42■■□□□ 1.5
APOE-204ENST00000446996 SYT2Q8N9I0 419 aaPredicted RBP24.42■■□□□ 1.5
APOE-204ENST00000446996 TIPINQ9BVW5 301 aa24.42■■□□□ 1.5
APOE-204ENST00000446996 PADI3Q9ULW8 664 aa24.42■■□□□ 1.5
APOE-204ENST00000446996 GINS2Q9Y248 185 aa24.42■■□□□ 1.5
APOE-204ENST00000446996 SLC4A7Q9Y6M7 1214 aa24.42■■□□□ 1.5
APOE-204ENST00000446996 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 DARSP14868 501 aaKnown RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 LAMTOR4Q0VGL1 99 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 PAK2Q13177 524 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 ZRSR1Q15695 479 aaKnown RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 FOXD4L6Q3SYB3 417 aaPredicted RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 FOXD4L3Q6VB84 417 aaPredicted RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 KCNK18Q7Z418 384 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 TMEM40Q8WWA1 233 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 NLRP7Q8WX94 980 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 SYMPKQ92797 1274 aaKnown RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 EPSTI1Q96J88 318 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 SLC9A7Q96T83 725 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 SCAND2PQ9GZW5 306 aaPredicted RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 ERVK-5Q9HDB9 667 aa24.41■■□□□ 1.5
APOE-204ENST00000446996 CXXC1Q9P0U4 656 aaPredicted RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 NOC2LQ9Y3T9 749 aaKnown RBP24.41■■□□□ 1.5
APOE-204ENST00000446996 ZBBXA8MT70 800 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 CD52P31358 61 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 KCNJ6P48051 423 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 TFDP1Q14186 410 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 PCBP1Q15365 356 aaKnown RBP eCLIP24.4■■□□□ 1.51e-14■■■■■ 36.2
APOE-204ENST00000446996 TCTN1Q2MV58 587 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 RINT1Q6NUQ1 792 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 SRGAP1Q7Z6B7 1085 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 IFNLR1Q8IU57 520 aaPredicted RBP24.4■■□□□ 1.5
APOE-204ENST00000446996 NFKBIZQ9BYH8 718 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 STK17AQ9UEE5 414 aa24.4■■□□□ 1.5
APOE-204ENST00000446996 A0A087WZ62 844 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 SLC12A3P55017 1021 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 WDR5P61964 334 aaKnown RBP24.39■■□□□ 1.49
APOE-204ENST00000446996 SMAD3P84022 425 aaKnown RBP24.39■■□□□ 1.49
APOE-204ENST00000446996 KARSQ15046 597 aaKnown RBP24.39■■□□□ 1.49
APOE-204ENST00000446996 AXDND1Q5T1B0 1012 aaPredicted RBP24.39■■□□□ 1.49
APOE-204ENST00000446996 C1orf186Q6ZWK4 172 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 USP49Q70CQ1 688 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 RASSF8Q8NHQ8 419 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 KIFAP3Q92845 792 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 SCLT1Q96NL6 688 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 FDXACB1Q9BRP7 624 aaPredicted RBP24.39■■□□□ 1.49
APOE-204ENST00000446996 IFT122Q9HBG6 1241 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 BMP2KQ9NSY1 1161 aaPredicted RBP24.39■■□□□ 1.49
APOE-204ENST00000446996 PCDHA7Q9UN72 937 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 ST3GAL5Q9UNP4 418 aa24.39■■□□□ 1.49
APOE-204ENST00000446996 PLA2G4BP0C869 781 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 PLCG1P19174 1290 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 GUCY2CP25092 1073 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 SPECC1Q5M775 1068 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 CCDC73Q6ZRK6 1079 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 FAM228AQ86W67 206 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 PPP1R16BQ96T49 567 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 PLIN2Q99541 437 aa24.38■■□□□ 1.49
APOE-204ENST00000446996 POLR3FQ9H1D9 316 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms