RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 EMC2Q15006 297 aa23.25■■□□□ 1.31
GARNL3-209ENST00000446764 POTEGQ6S5H5 508 aa23.25■■□□□ 1.31
GARNL3-209ENST00000446764 FAM43BQ6ZT52 329 aaPredicted RBP23.25■■□□□ 1.31
GARNL3-209ENST00000446764 KSR1Q8IVT5 923 aa23.25■■□□□ 1.31
GARNL3-209ENST00000446764 SCLT1Q96NL6 688 aa23.25■■□□□ 1.31
GARNL3-209ENST00000446764 NACC1Q96RE7 527 aa23.25■■□□□ 1.31
GARNL3-209ENST00000446764 TSPYL2Q9H2G4 693 aaPredicted RBP23.25■■□□□ 1.31
GARNL3-209ENST00000446764 XPNPEP1Q9NQW7 623 aa23.25■■□□□ 1.31
GARNL3-209ENST00000446764 A0A087WZ62 844 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 GAS2O43903 313 aaKnown RBP23.24■■□□□ 1.31
GARNL3-209ENST00000446764 MGEA5O60502 916 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 MUTP22033 750 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 CCT6AP40227 531 aaKnown RBP23.24■■□□□ 1.31
GARNL3-209ENST00000446764 HTRA4P83105 476 aaPredicted RBP23.24■■□□□ 1.31
GARNL3-209ENST00000446764 TAP1Q03518 808 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 ECM1Q16610 540 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 MTRQ99707 1265 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 FDXACB1Q9BRP7 624 aaPredicted RBP23.24■■□□□ 1.31
GARNL3-209ENST00000446764 GCOM2Q9BZD3 368 aaPredicted RBP23.24■■□□□ 1.31
GARNL3-209ENST00000446764 DBR1Q9UK59 544 aaKnown RBP23.24■■□□□ 1.31
GARNL3-209ENST00000446764 INSL6Q9Y581 213 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 STK24Q9Y6E0 443 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 SIP14410 1827 aa23.24■■□□□ 1.31
GARNL3-209ENST00000446764 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
GARNL3-209ENST00000446764 PP2D1A8MPX8 630 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 STX6O43752 255 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 DGAT1O75907 488 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 ZNF410Q86VK4 478 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 SNX29Q8TEQ0 813 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 TCP11Q8WWU5 503 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 PRPF31Q8WWY3 499 aaKnown RBP23.23■■□□□ 1.31
GARNL3-209ENST00000446764 PSPC1Q8WXF1 523 aaKnown RBP23.23■■□□□ 1.31
GARNL3-209ENST00000446764 NLRP4Q96MN2 994 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 CCDC43Q96MW1 224 aaKnown RBP23.23■■□□□ 1.31
GARNL3-209ENST00000446764 COL4A3BPQ9Y5P4 624 aa23.23■■□□□ 1.31
GARNL3-209ENST00000446764 CSDE1O75534 798 aaKnown RBP23.22■■□□□ 1.31
GARNL3-209ENST00000446764 FGFR4P22455 802 aa23.22■■□□□ 1.31
GARNL3-209ENST00000446764 CDC25AP30304 524 aa23.22■■□□□ 1.31
GARNL3-209ENST00000446764 ARL6IP4Q66PJ3 421 aaKnown RBP23.22■■□□□ 1.31
GARNL3-209ENST00000446764 MYLIPQ8WY64 445 aa23.22■■□□□ 1.31
GARNL3-209ENST00000446764 ADAM2Q99965 735 aa23.22■■□□□ 1.31
GARNL3-209ENST00000446764 ATP6V0A4Q9HBG4 840 aa23.22■■□□□ 1.31
GARNL3-209ENST00000446764 RGS18Q9NS28 235 aa23.22■■□□□ 1.31
GARNL3-209ENST00000446764 VWA3AA6NCI4 1184 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 HSP90AA1P07900 732 aaKnown RBP23.21■■□□□ 1.31
GARNL3-209ENST00000446764 LAMTOR4Q0VGL1 99 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 DSC3Q14574 896 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 SF3A1Q15459 793 aaKnown RBP23.21■■□□□ 1.31
GARNL3-209ENST00000446764 KRT79Q5XKE5 535 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 FAM173BQ6P4H8 233 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 CRIPAKQ8N1N5 446 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 SP7Q8TDD2 431 aaPredicted RBP23.21■■□□□ 1.31
GARNL3-209ENST00000446764 YME1L1Q96TA2 773 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 MMTAG2Q9BU76 263 aaKnown RBP23.21■■□□□ 1.31
GARNL3-209ENST00000446764 PRDM12Q9H4Q4 367 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 KIAA1024Q9UPX6 916 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 STXBP5LQ9Y2K9 1186 aa23.21■■□□□ 1.31
GARNL3-209ENST00000446764 DENND3A2RUS2 1198 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 ASAP2O43150 1006 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 USO1O60763 962 aaKnown RBP23.2■■□□□ 1.3
GARNL3-209ENST00000446764 BMP15O95972 392 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 SPRED2Q7Z698 418 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 INO80BQ9C086 356 aaPredicted RBP23.2■■□□□ 1.3
GARNL3-209ENST00000446764 CERS4Q9HA82 394 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 IFT122Q9HBG6 1241 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 C1orf112Q9NSG2 853 aa23.2■■□□□ 1.3
GARNL3-209ENST00000446764 LINC01553A4QN01 128 aa23.19■■□□□ 1.3
GARNL3-209ENST00000446764 SRGAP2CP0DJJ0 459 aa23.19■■□□□ 1.3
GARNL3-209ENST00000446764 ARL2P36404 184 aa23.19■■□□□ 1.3
GARNL3-209ENST00000446764 SARSP49591 514 aaKnown RBP23.19■■□□□ 1.3
GARNL3-209ENST00000446764 SLC24A5Q71RS6 500 aa23.19■■□□□ 1.3
GARNL3-209ENST00000446764 NPAS4Q8IUM7 802 aa23.19■■□□□ 1.3
GARNL3-209ENST00000446764 ZSCAN16Q9H4T2 348 aaPredicted RBP23.19■■□□□ 1.3
GARNL3-209ENST00000446764 DDX19AQ9NUU7 478 aaKnown RBP23.19■■□□□ 1.3
GARNL3-209ENST00000446764 CLIC4Q9Y696 253 aa23.19■■□□□ 1.3
GARNL3-209ENST00000446764 WDR81Q562E7 1941 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 ARHGEF35A5YM69 484 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 C9IYK1 514 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 DGKIO75912 1065 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 MXD4Q14582 209 aaPredicted RBP23.18■■□□□ 1.3
GARNL3-209ENST00000446764 PADI6Q6TGC4 694 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 MAEAQ7L5Y9 396 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 RNF149Q8NC42 400 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 SPRYD3Q8NCJ5 442 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 ASAP3Q8TDY4 903 aa23.18■■□□□ 1.3
GARNL3-209ENST00000446764 RC3H2Q9HBD1 1191 aaKnown RBP23.18■■□□□ 1.3
GARNL3-209ENST00000446764 STAG3L1P0CL83 205 aa23.17■■□□□ 1.3
GARNL3-209ENST00000446764 ZSCAN20P17040 1043 aaPredicted RBP23.17■■□□□ 1.3
GARNL3-209ENST00000446764 SFPQP23246 707 aaKnown RBP eCLIP23.17■■□□□ 1.3
GARNL3-209ENST00000446764 FAM189BP81408 668 aa23.17■■□□□ 1.3
GARNL3-209ENST00000446764 PTPAQ15257 358 aa23.17■■□□□ 1.3
GARNL3-209ENST00000446764 ARNTL2Q8WYA1 636 aa23.17■■□□□ 1.3
GARNL3-209ENST00000446764 ZNF689Q96CS4 500 aaPredicted RBP23.17■■□□□ 1.3
GARNL3-209ENST00000446764 BHMT2Q9H2M3 363 aa23.17■■□□□ 1.3
GARNL3-209ENST00000446764 GPRC5CQ9NQ84 441 aa23.17■■□□□ 1.3
GARNL3-209ENST00000446764 PTPRSQ13332 1948 aa23.16■■□□□ 1.3
GARNL3-209ENST00000446764 EPOPA6NHQ4 379 aa23.16■■□□□ 1.3
GARNL3-209ENST00000446764 E9PMD0 336 aa23.16■■□□□ 1.3
GARNL3-209ENST00000446764 FOSL2P15408 326 aa23.16■■□□□ 1.3
GARNL3-209ENST00000446764 CYP11B2P19099 503 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms