RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TM4SF1	P30408	202 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	HNRNPH3	P31942	346 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	RWDD2B	P57060	319 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	ZFYVE27	Q5T4F4	411 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	KCNV2	Q8TDN2	545 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	FAM210A	Q96ND0	272 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	PRMT1	Q99873	361 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	GAN	Q9H2C0	597 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	DHX36	Q9H2U1	1008 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	SEMA4A	Q9H3S1	761 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	DBNDD1	Q9H9R9	158 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	POLL	Q9UGP5	575 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	USP20	Q9Y2K6	914 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	UTP11	Q9Y3A2	253 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	SSU72P8	A0A1W2PR75	194 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	C21orf2	O43822	256 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	NR3C1	P04150	777 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	FNTA	P49354	379 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	MRPL12	P52815	198 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	DRAP1	Q14919	205 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	PPP1R18	Q6NYC8	613 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	LLGL2	Q6P1M3	1020 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	C16orf86	Q6ZW13	317 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	SYCP3	Q8IZU3	236 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	DAGLB	Q8NCG7	672 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	CCDC26	Q8TAB7	109 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	ZNF483	Q8TF39	744 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	PRCC	Q92733	491 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	ANO3	Q9BYT9	981 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	TRIM33	Q9UPN9	1127 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	DAGLA	Q9Y4D2	1042 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	RPS6KL1	Q9Y6S9	549 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	CACNA1S	Q13698	1873 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	ANKRD36C	Q5JPF3	1778 aa		13.59	□□□□□ -0.23
DDR1-238	ENST00000446312	EML1	O00423	815 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	PPP2R2A	P63151	447 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	CDK17	Q00537	523 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	SLC29A2	Q14542	456 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	ACCSL	Q4AC99	568 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	MICALCL	Q6ZW33	695 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	SPDL1	Q96EA4	605 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	RIC8A	Q9NPQ8	531 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	CTNNAL1	Q9UBT7	734 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	DNAJC12	Q9UKB3	198 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	AMFR	Q9UKV5	643 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	DNM3	Q9UQ16	869 aa		13.58	□□□□□ -0.23
DDR1-238	ENST00000446312	PJA2	O43164	708 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	MME	P08473	750 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	HOXD13	P35453	343 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	SKOR1	P84550	965 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	CRYM	Q14894	314 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	SEPT2	Q15019	361 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	LONRF1	Q17RB8	773 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	MSL3	Q8N5Y2	521 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	HVCN1	Q96D96	273 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	NGLY1	Q96IV0	654 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	FMO2	Q99518	471 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	ZNF287	Q9HBT7	754 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM107A	O95990	144 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	USP11	P51784	963 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	RHBDL3	P58872	404 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	GSTO1	P78417	241 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	MSL1	Q68DK7	614 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	GALNT17	Q6IS24	598 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	RNF10	Q8N5U6	811 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	LNX1	Q8TBB1	728 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	ALG3	Q92685	438 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	CCDC127	Q96BQ5	260 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	3e-6	■■■■□ 19.3
DDR1-238	ENST00000446312	GGA1	Q9UJY5	639 aa		13.58	□□□□□ -0.24
DDR1-238	ENST00000446312		A8MUI8	341 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	ANKRD63	C9JTQ0	380 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM86B1	E9PN63	330 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	FLOT1	O75955	427 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM13A	O94988	1023 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	FAM86B2	P0C5J1	330 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	TNFAIP3	P21580	790 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	SP4	Q02446	784 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	CBWD6	Q4V339	395 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	ZCWPW2	Q504Y3	356 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	CBWD3	Q5JTY5	395 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	CBWD5	Q5RIA9	395 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	LRRC34	Q8IZ02	419 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	SLC30A5	Q8TAD4	765 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	WHAMM	Q8TF30	809 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	C1orf54	Q8WWF1	131 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	ISCU	Q9H1K1	167 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	TPX2	Q9ULW0	747 aa	Known RBP	13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	EZR	P15311	586 aa	Known RBP	13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	FXR2	P51116	673 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	2e-6	■■■□□ 15.4
DDR1-238	ENST00000446312	ATG4A	Q8WYN0	398 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	KCTD10	Q9H3F6	313 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	MCM8	Q9UJA3	840 aa		13.57	□□□□□ -0.24
DDR1-238	ENST00000446312	PNMA6F	A0A0J9YX94	578 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	EPB41	P11171	864 aa	Known RBP	13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	PRLR	P16471	622 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	STAT1	P42224	750 aa		13.56	□□□□□ -0.24
DDR1-238	ENST00000446312	GCLM	P48507	274 aa		13.56	□□□□□ -0.24

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