RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PSMD1Q99460 953 aa15.43■□□□□ 0.06
ERCC3-203ENST00000445889 SUCLA2Q9P2R7 463 aaPredicted RBP15.43■□□□□ 0.06
ERCC3-203ENST00000445889 THRAP3Q9Y2W1 955 aaKnown RBP15.43■□□□□ 0.06
ERCC3-203ENST00000445889 IGKV6D-41A0A0C4DH26 115 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 FRMD3A2A2Y4 597 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 hCG_1984214I3L0E3 225 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 GDF11O95390 407 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 IL1R1P14778 569 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 ZNF76P36508 570 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 KCNJ1P48048 391 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 GKAP1Q5VSY0 366 aaPredicted RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 CCDC25Q86WR0 208 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 FAM186BQ8IYM0 893 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 ZNF713Q8N859 430 aaPredicted RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 SYT2Q8N9I0 419 aaPredicted RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 GIMAP7Q8NHV1 300 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 SLC20A1Q8WUM9 679 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 RNF25Q96BH1 459 aaPredicted RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 TBC1D31Q96DN5 1066 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 BTBD6Q96KE9 485 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 SEMA4AQ9H3S1 761 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 AZI2Q9H6S1 392 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 DBR1Q9UK59 544 aaKnown RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 BZW2Q9Y6E2 419 aaKnown RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 MYH7BA7E2Y1 1941 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 GCFC2P16383 781 aaKnown RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 SCTRP47872 440 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 JAM2P57087 298 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 LRRC14Q15048 493 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 OTUD6AQ7L8S5 288 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 PARP9Q8IXQ6 854 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 C1orf131Q8NDD1 294 aaKnown RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 ETNPPLQ8TBG4 499 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 MGARPQ8TDB4 240 aa15.42■□□□□ 0.06
ERCC3-203ENST00000445889 CTNNBL1Q8WYA6 563 aaPredicted RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 POP1Q99575 1024 aaKnown RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 DNAJC17Q9NVM6 304 aaKnown RBP15.42■□□□□ 0.06
ERCC3-203ENST00000445889 TCRBV7S2A1N4TA0A589 114 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 MSH4O15457 936 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 SLFN13Q68D06 897 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 SLFN11Q7Z7L1 901 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 CALR3Q96L12 384 aaKnown RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 PCIF1Q9H4Z3 704 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 DAAM1Q9Y4D1 1078 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 FOXN3O00409 490 aaPredicted RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 PDXKO00764 312 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 DDX3YO15523 660 aaKnown RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 POU5F1Q01860 360 aaKnown RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 MTMR3Q13615 1198 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 FAM133BQ5BKY9 247 aaKnown RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 EPM2AIP1Q7L775 607 aaPredicted RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 ZDHHC14Q8IZN3 488 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 BANK1Q8NDB2 785 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 EPS8L3Q8TE67 593 aaKnown RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 LMBR1Q8WVP7 490 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 LENG9Q96B70 501 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 C8orf37Q96NL8 207 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 ELAC2Q9BQ52 826 aaKnown RBP15.41■□□□□ 0.06
ERCC3-203ENST00000445889 EPB41L4BQ9H329 900 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 DNAJC18Q9H819 358 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 CD2APQ9Y5K6 639 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 LAMB2P55268 1798 aa15.41■□□□□ 0.06
ERCC3-203ENST00000445889 CCDC188H7C350 402 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 MMEP08473 750 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 RPSAP08865 295 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 RPA1P27694 616 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 SOX5P35711 763 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 PRKCIP41743 596 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 ADCY1Q08828 1119 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 SNCBQ16143 134 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 C10orf76Q5T2E6 689 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 RASGEF1CQ8N431 466 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 OLIG1Q8TAK6 271 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 HVCN1Q96D96 273 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 PRMT1Q99873 361 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 EIF2AK1Q9BQI3 630 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 TYW1Q9NV66 732 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 PKD2L1Q9P0L9 805 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 TNFAIP3P21580 790 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 DRD4P21917 467 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 CDC42EP5Q6NZY7 148 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 ZC3H3Q8IXZ2 948 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 TATDN2Q93075 761 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 XPO6Q96QU8 1125 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 TPX2Q9ULW0 747 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 GAKO14976 1311 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 BTNL10A8MVZ5 291 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 ANKRD63C9JTQ0 380 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 CES2O00748 559 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 FAM13AO94988 1023 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
ERCC3-203ENST00000445889 DLG4P78352 724 aa15.4■□□□□ 0.06
ERCC3-203ENST00000445889 RINT1Q6NUQ1 792 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms