RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 KCND2Q9NZV8 630 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 STK17AQ9UEE5 414 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 KCNG1Q9UIX4 513 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 COL4A3BPQ9Y5P4 624 aa15.66■□□□□ 0.1
SSBP3-208ENST00000444533 A0A087WWV3 80 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 A0A1W2PPC1 479 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 E9PMD0 336 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 RPS6KA5O75582 802 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 BAIAP3O94812 1187 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 KRT18P05783 430 aaKnown RBP15.65■□□□□ 0.1
SSBP3-208ENST00000444533 PLA2G4BP0C869 781 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 GHRP10912 638 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 CYP11B2P19099 503 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 PLCG1P19174 1290 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 STAT6P42226 847 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 KCNJ6P48051 423 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 GRIN1Q05586 938 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 NCBP1Q09161 790 aaKnown RBP15.65■□□□□ 0.1
SSBP3-208ENST00000444533 GRB10Q13322 594 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 PPP2R5AQ15172 486 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 ECM1Q16610 540 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 TMEM119Q4V9L6 283 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 ZNF365Q70YC5 407 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 MAEAQ7L5Y9 396 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 TDHQ8IZJ6 230 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 LEO1Q8WVC0 666 aaPredicted RBP15.65■□□□□ 0.1
SSBP3-208ENST00000444533 KIFAP3Q92845 792 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 CEP89Q96ST8 783 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 PPP1R16BQ96T49 567 aa15.65■□□□□ 0.1
SSBP3-208ENST00000444533 TNRC18O15417 2968 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 LTBP2Q14767 1821 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 ABHD14A-ACY1A0A1B0GW23 586 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 NBNO60934 754 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 CXCL10P02778 98 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 PHKA2P46019 1235 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 GPC3P51654 580 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 MGAT3Q09327 533 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 FBXO47Q5MNV8 452 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 OTOP2Q7RTS6 562 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 SYT2Q8N9I0 419 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 PRPF31Q8WWY3 499 aaKnown RBP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 LARP4BQ92615 738 aaKnown RBP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 OSMRQ99650 979 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 FTHL17Q9BXU8 183 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 LRRC27Q9C0I9 530 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 POLR3FQ9H1D9 316 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-208ENST00000444533 PCDHA7Q9UN72 937 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 LOXHD1Q8IVV2 1947 aa15.64■□□□□ 0.09
SSBP3-208ENST00000444533 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 GPR32O75388 356 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 SRGAP2CP0DJJ0 459 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 EIF4BP23588 611 aaKnown RBP15.63■□□□□ 0.09
SSBP3-208ENST00000444533 AMPD3Q01432 767 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 LAMTOR4Q0VGL1 99 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 NFX1Q12986 1120 aaKnown RBP15.63■□□□□ 0.09
SSBP3-208ENST00000444533 DHX8Q14562 1220 aaKnown RBP15.63■□□□□ 0.09
SSBP3-208ENST00000444533 LPIN1Q14693 890 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 PLEKHG4Q58EX7 1191 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 TMEM240Q5SV17 173 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 ADALQ6DHV7 355 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 SV2BQ7L1I2 683 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 ZBTB8OSQ8IWT0 167 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 IQUBQ8NA54 791 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 RNF149Q8NC42 400 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 RAD54LQ92698 747 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 CCDC34Q96HJ3 373 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 PNMA5Q96PV4 448 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.63■□□□□ 0.092e-7■□□□□ 10
SSBP3-208ENST00000444533 CUEDC2Q9H467 287 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 SLC4A7Q9Y6M7 1214 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 CEP290O15078 2479 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 EVPLQ92817 2033 aa15.63■□□□□ 0.09
SSBP3-208ENST00000444533 LRRIQ4A6NIV6 560 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 ZSCAN20P17040 1043 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-208ENST00000444533 DMP1Q13316 513 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-208ENST00000444533 DRP2Q13474 957 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 RINT1Q6NUQ1 792 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 TRAF7Q6Q0C0 670 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 GPBP1Q86WP2 473 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 PDILTQ8N807 584 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 HERVK_113Q902F9 699 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 C2orf40Q9H1Z8 148 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 ADAMTS10Q9H324 1103 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 C17orf75Q9HAS0 396 aa15.62■□□□□ 0.09
SSBP3-208ENST00000444533 COLQQ9Y215 455 aaPredicted RBP15.62■□□□□ 0.09
SSBP3-208ENST00000444533 A0A087WZ62 844 aa15.61■□□□□ 0.09
SSBP3-208ENST00000444533 DENND3A2RUS2 1198 aa15.61■□□□□ 0.09
SSBP3-208ENST00000444533 TBCAO75347 108 aaKnown RBP15.61■□□□□ 0.09
SSBP3-208ENST00000444533 ERLIN2O94905 339 aa15.61■□□□□ 0.09
SSBP3-208ENST00000444533 AMHP03971 560 aa15.61■□□□□ 0.09
SSBP3-208ENST00000444533 DARSP14868 501 aaKnown RBP15.61■□□□□ 0.09
SSBP3-208ENST00000444533 CMA1P23946 247 aa15.61■□□□□ 0.09
SSBP3-208ENST00000444533 GUCY2CP25092 1073 aa15.61■□□□□ 0.09
SSBP3-208ENST00000444533 CD52P31358 61 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms