RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 PPM1AP35813 382 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 PLA2G5P39877 138 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 NDUFV1P49821 464 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 COASYQ13057 564 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 FAM102BQ5T8I3 360 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 EXOC8Q8IYI6 725 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 MSLNLQ96KJ4 702 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 INO80BQ9C086 356 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 IGFLR1Q9H665 355 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 TLR9Q9NR96 1032 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 TYW1Q9NV66 732 aaKnown RBP18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 IGKV6-21A0A0C4DH24 114 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 A0A0U1RQF3 1178 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 CHMP2AO43633 222 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 EIF5BO60841 1220 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 PPFIA3O75145 1194 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 TBX10O75333 385 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 FGF18O76093 207 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 GATMP50440 423 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 ANAPC15P60006 121 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 NPY5RQ15761 445 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 PPP4R3AQ6IN85 833 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 ZNF410Q86VK4 478 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 THNSL1Q8IYQ7 743 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 ABI1Q8IZP0 508 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 LRRC43Q8N309 656 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 LRRC71Q8N4P6 559 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 ETNPPLQ8TBG4 499 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 FAM122AQ96E09 287 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 TRAIPQ9BWF2 469 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 GCOM2Q9BZD3 368 aaPredicted RBP18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 CWH43Q9H720 699 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 C11orf16Q9NQ32 467 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
CTDSP1-204ENST00000443891 TBX3O15119 743 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 SRGAP2BP0DMP2 458 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 IRS1P35568 1242 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 PSMC5P62195 406 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 DLX2Q07687 328 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 ANKRD1Q15327 319 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 UGCGQ16739 394 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 ECHDC2Q86YB7 292 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 SMRP1Q8NCR6 262 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 MICAL1Q8TDZ2 1067 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 SCLT1Q96NL6 688 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 CASD1Q96PB1 797 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 PPP1R16BQ96T49 567 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 TLE6Q9H808 572 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 DDX25Q9UHL0 483 aaKnown RBP18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 EVPLQ92817 2033 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 LOXHD1Q8IVV2 1947 aa18.35■□□□□ 0.53
CTDSP1-204ENST00000443891 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 CCDC194A0A1B0GVG4 234 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 TDP2O95551 362 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 SKIP12755 728 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 GTF2F1P35269 517 aaKnown RBP eCLIP18.34■□□□□ 0.531e-8■■■□□ 18.5
CTDSP1-204ENST00000443891 NRIP1P48552 1158 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 KRT17Q04695 432 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 PPP2R5CQ13362 524 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 ADGRD2Q7Z7M1 963 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 NLRP7Q8WX94 980 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 MRPS27Q92552 414 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 WASF1Q92558 559 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 CEP89Q96ST8 783 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 PHF20Q9BVI0 1012 aa18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 MRPL9Q9BYD2 267 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 SEPT9Q9UHD8 586 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-204ENST00000443891 FSCN2O14926 492 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 LINC01565O15544 149 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 MAFO75444 373 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 STBD1O95210 358 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 FGFR1P11362 822 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 STK3Q13188 491 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 TMEM184AQ6ZMB5 413 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 NEK8Q86SG6 692 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 ZNF558Q96NG5 402 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 KCNMB3Q9NPA1 279 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 CLEC1BQ9P126 229 aa18.33■□□□□ 0.52
CTDSP1-204ENST00000443891 PFKFB2O60825 505 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 P4HBP07237 508 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 IBSPP21815 317 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 SCRN1Q12765 414 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 BMS1Q14692 1282 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 DUSP6Q16828 381 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 INF2Q27J81 1249 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 MTERF2Q49AM1 385 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 HERC4Q5GLZ8 1057 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 KCNT2Q6UVM3 1135 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 ZNF598Q86UK7 904 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 KCNH6Q9H252 994 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 RNF19AQ9NV58 838 aa18.32■□□□□ 0.52
CTDSP1-204ENST00000443891 RAPGEFL1Q9UHV5 662 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms