RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ERAP1Q9NZ08 941 aa10.47□□□□□ -0.73
SMPD4P1-203ENST00000443839 LIMA1Q9UHB6 759 aaKnown RBP10.47□□□□□ -0.73
SMPD4P1-203ENST00000443839 UBE4BO95155 1302 aa10.47□□□□□ -0.73
SMPD4P1-203ENST00000443839 A0A1B0GTH6 734 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 CCDC169A6NNP5 214 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 PES1O00541 588 aaKnown RBP10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 N4BP3O15049 544 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 CALUO43852 315 aaPredicted RBP10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 HOXD13P35453 343 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 MAP2K2P36507 400 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 SOX10P56693 466 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 SP3Q02447 781 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 KCNA1Q09470 495 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 ALCAMQ13740 583 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 EDRF1Q3B7T1 1238 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 TMC6Q7Z403 805 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 FILIP1Q7Z7B0 1213 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 SYCP3Q8IZU3 236 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 SLC17A8Q8NDX2 589 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 VPS16Q9H269 839 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 C17orf75Q9HAS0 396 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 TYW1Q9NV66 732 aaKnown RBP10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
SMPD4P1-203ENST00000443839 DNAH12Q6ZR08 3092 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 PDXKO00764 312 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 SLC16A4O15374 487 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 PPFIA4O75335 1185 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 LGALS2P05162 132 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZNF286BP0CG31 522 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 MTIF2P46199 727 aaKnown RBP10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 VEGFBP49765 207 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 FLT3LGP49771 235 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 HTRA3P83110 453 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 TBC1D8BQ0IIM8 1120 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 PLCB4Q15147 1175 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 TARBP2Q15633 366 aaKnown RBP10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 LRRC55Q6ZSA7 311 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 HS2ST1Q7LGA3 356 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 KSR1Q8IVT5 923 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 IFT74Q96LB3 600 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 POLR3FQ9H1D9 316 aaPredicted RBP10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 DHX33Q9H6R0 707 aaKnown RBP10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 KMT5AQ9NQR1 393 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 PDLIM7Q9NR12 457 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 INTS13Q9NVM9 706 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZNF215Q9UL58 517 aaPredicted RBP10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 TRAF3IP3Q9Y228 551 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 PPME1Q9Y570 386 aa10.46□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZSWIM8A7E2V4 1837 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 LRRC10BA6NIK2 292 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 CETN3O15182 167 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 DYNC1LI2O43237 492 aaPredicted RBP10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 ADCY6O43306 1168 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 PPP1R37O75864 691 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZNF865P0CJ78 1059 aaPredicted RBP10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 NR2F2P24468 414 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 NPTX2P47972 431 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 COPB1P53618 953 aaKnown RBP10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 RTP1P59025 263 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 PRKCZQ05513 592 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 ADAM9Q13443 819 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 NR1I3Q14994 352 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 VSTM4Q8IW00 320 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 CEP63Q96MT8 703 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 TUBGCP2Q9BSJ2 902 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 RNF186Q9NXI6 227 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 NRBP1Q9UHY1 535 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 GABRQQ9UN88 632 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 HBP1O60381 514 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 NR3C1P04150 777 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 MMP3P08254 477 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 NCKAP1LP55160 1127 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 DGKDQ16760 1214 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 CCDC40Q4G0X9 1142 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 MFSD14CQ5VZR4 134 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 CCDC186Q7Z3E2 898 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 TLK2Q86UE8 772 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 GOLGA5Q8TBA6 731 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 KIFC3Q9BVG8 833 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 GBP3Q9H0R5 595 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 TMEM206Q9H813 350 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 FAM184BQ9ULE4 1060 aa10.45□□□□□ -0.74
SMPD4P1-203ENST00000443839 ZMYM2Q9UBW7 1377 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 H3BRB1 525 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 MAFO75444 373 aaPredicted RBP10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 GNA14O95837 355 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 PPP2R5AQ15172 486 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 SPECC1LQ69YQ0 1117 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 TMEM161BQ8NDZ6 487 aa10.44□□□□□ -0.74
SMPD4P1-203ENST00000443839 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms