RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 DNM2P50570 870 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 CDC42EP1Q00587 391 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 DSC3Q14574 896 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 C4orf19Q8IY42 314 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 FBXO18Q8NFZ0 1043 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 SYMPKQ92797 1274 aaKnown RBP22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 MRPL38Q96DV4 380 aaKnown RBP22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 SCLT1Q96NL6 688 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 ASB2Q96Q27 587 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 CYP26B1Q9NR63 512 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 RNF216Q9NWF9 866 aaPredicted RBP22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 PCDHB7Q9Y5E2 793 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 DARSP14868 501 aaKnown RBP22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 GATMP50440 423 aa22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 NPEPPSP55786 919 aa22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 ZNF579Q8NAF0 562 aaKnown RBP22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 FAM184AQ8NB25 1140 aa22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 NLRP7Q8WX94 980 aa22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 DYDC2Q96IM9 177 aa22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 MTMR9Q96QG7 549 aa22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 JPH2Q9BR39 696 aaPredicted RBP22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 TTC12Q9H892 705 aaPredicted RBP22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 MRPL42Q9Y6G3 142 aaKnown RBP22.85■■□□□ 1.25
UBE2D4-205ENST00000443780 ATP2B1P20020 1258 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 FAM189BP81408 668 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 CYP4A11Q02928 519 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 CTTNQ14247 550 aaKnown RBP22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 PTPROQ16827 1216 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 PAN2Q504Q3 1202 aaKnown RBP22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 CEP170P1Q96L14 293 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 FOXP1Q9H334 677 aaPredicted RBP22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 ZSWIM4Q9H7M6 989 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 UPF2Q9HAU5 1272 aaKnown RBP22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 SUCLA2Q9P2R7 463 aaPredicted RBP22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 COG5Q9UP83 839 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 PPME1Q9Y570 386 aa22.84■■□□□ 1.25
UBE2D4-205ENST00000443780 ST18O60284 1047 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 SLITRK3O94933 977 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 YWHABP31946 246 aaKnown RBP22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 TXKP42681 527 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 TFF2Q03403 129 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 OTUD6AQ7L8S5 288 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 TPH2Q8IWU9 490 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 EIF2AK1Q9BQI3 630 aaKnown RBP22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 C11orf84Q9BUA3 381 aaPredicted RBP22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 GCOM2Q9BZD3 368 aaPredicted RBP22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 DHX33Q9H6R0 707 aaKnown RBP22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 VCANP13611 3396 aa22.83■■□□□ 1.25
UBE2D4-205ENST00000443780 PLXNA4Q9HCM2 1894 aa22.83■■□□□ 1.24
UBE2D4-205ENST00000443780 A0A087WZ62 844 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 CSDE1O75534 798 aaKnown RBP22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 ZSCAN20P17040 1043 aaPredicted RBP22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 MCM7P33993 719 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 ZNF410Q86VK4 478 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 RHPN2Q8IUC4 686 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 EXOC8Q8IYI6 725 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 IL27Q8NEV9 243 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 SLC7A3Q8WY07 619 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 HLA-CQ95604 372 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 HSD17B14Q9BPX1 270 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 FDXACB1Q9BRP7 624 aaPredicted RBP22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 PLVAPQ9BX97 442 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 TMEM60Q9H2L4 133 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 ELAC1Q9H777 363 aaKnown RBP22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 TMEM161AQ9NX61 479 aa22.82■■□□□ 1.24
UBE2D4-205ENST00000443780 ZBTB39O15060 712 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 FGFR4P22455 802 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 RFC5P40937 340 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 POLGP54098 1239 aaPredicted RBP22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 AAK1Q2M2I8 961 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 XKR9Q5GH70 373 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 FAM102BQ5T8I3 360 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 KSR1Q8IVT5 923 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 ATP6V0A4Q9HBG4 840 aa22.81■■□□□ 1.24
UBE2D4-205ENST00000443780 GRM6O15303 877 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 LYPLA2O95372 231 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 TIGD5Q53EQ6 642 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 NOSTRINQ8IVI9 506 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 NEK9Q8TD19 979 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 P2RX5Q93086 422 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 LMAN2LQ9H0V9 348 aa22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 SPTBN5Q9NRC6 3674 aaKnown RBP22.8■■□□□ 1.24
UBE2D4-205ENST00000443780 TBKBP1A7MCY6 615 aa22.79■■□□□ 1.24
UBE2D4-205ENST00000443780 ORC2Q13416 577 aaPredicted RBP22.79■■□□□ 1.24
UBE2D4-205ENST00000443780 GNL2Q13823 731 aaKnown RBP22.79■■□□□ 1.24
UBE2D4-205ENST00000443780 NLRP4Q96MN2 994 aa22.79■■□□□ 1.24
UBE2D4-205ENST00000443780 INO80BQ9C086 356 aaPredicted RBP22.79■■□□□ 1.24
UBE2D4-205ENST00000443780 COL4A3BPQ9Y5P4 624 aa22.79■■□□□ 1.24
UBE2D4-205ENST00000443780 POTEMA6NI47 508 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 CD2BP2O95400 341 aaKnown RBP22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 FGFR1P11362 822 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 SFPQP23246 707 aaKnown RBP eCLIP22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 EMC2Q15006 297 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 ZNF174Q15697 407 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 NAALADL2Q58DX5 795 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 ECHDC2Q86YB7 292 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 PRPF31Q8WWY3 499 aaKnown RBP22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 TMEM143Q96AN5 459 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 TMX3Q96JJ7 454 aa22.78■■□□□ 1.24
UBE2D4-205ENST00000443780 TBC1D32Q96NH3 1257 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms