RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 VCANP13611 3396 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 NEMFO60524 1076 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 MAFO75444 373 aaPredicted RBP22.49■■□□□ 1.19
LRCH3-208ENST00000443727 DARSP14868 501 aaKnown RBP22.49■■□□□ 1.19
LRCH3-208ENST00000443727 ATP2B1P20020 1258 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 GATMP50440 423 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 DRP2Q13474 957 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 SPOUT1Q5T280 376 aaKnown RBP22.49■■□□□ 1.19
LRCH3-208ENST00000443727 EXOC8Q8IYI6 725 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 SLC7A3Q8WY07 619 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 KIF2CQ99661 725 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 PLVAPQ9BX97 442 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
LRCH3-208ENST00000443727 ATP6V0A4Q9HBG4 840 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 RGL1Q9NZL6 768 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 PCDHA12Q9UN75 941 aa22.49■■□□□ 1.19
LRCH3-208ENST00000443727 TBKBP1A7MCY6 615 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 C9IYK1 514 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 KCNQ1P51787 676 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 POLGP54098 1239 aaPredicted RBP22.48■■□□□ 1.19
LRCH3-208ENST00000443727 NPEPPSP55786 919 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 HMGN5P82970 282 aaKnown RBP22.48■■□□□ 1.19
LRCH3-208ENST00000443727 CYP4A11Q02928 519 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 GNL2Q13823 731 aaKnown RBP22.48■■□□□ 1.19
LRCH3-208ENST00000443727 OTUD6AQ7L8S5 288 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 RHPN2Q8IUC4 686 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 TPH2Q8IWU9 490 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 DYDC2Q96IM9 177 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 CEP89Q96ST8 783 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 ZSWIM4Q9H7M6 989 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 TMEM161AQ9NX61 479 aa22.48■■□□□ 1.19
LRCH3-208ENST00000443727 IGKV6-21A0A0C4DH24 114 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 GRM6O15303 877 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 CSPG5O95196 566 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 LINC00271P0C7V0 271 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 YWHABP31946 246 aaKnown RBP22.47■■□□□ 1.19
LRCH3-208ENST00000443727 TXKP42681 527 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 CTTNQ14247 550 aaKnown RBP22.47■■□□□ 1.19
LRCH3-208ENST00000443727 DSC3Q14574 896 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 FAM102BQ5T8I3 360 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 UHRF1Q96T88 793 aaPredicted RBP22.47■■□□□ 1.19
LRCH3-208ENST00000443727 LMAN2LQ9H0V9 348 aa22.47■■□□□ 1.19
LRCH3-208ENST00000443727 NSUN3Q9H649 340 aaKnown RBP22.47■■□□□ 1.19
LRCH3-208ENST00000443727 TTC12Q9H892 705 aaPredicted RBP22.47■■□□□ 1.19
LRCH3-208ENST00000443727 REV3LO60673 3130 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 NLRC5Q86WI3 1866 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 A0A087WZ62 844 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 CSDE1O75534 798 aaKnown RBP22.46■■□□□ 1.19
LRCH3-208ENST00000443727 FGFR4P22455 802 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 MCM7P33993 719 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 RBM25P49756 843 aaKnown RBP22.46■■□□□ 1.19
LRCH3-208ENST00000443727 SPIRE1Q08AE8 756 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 RABEP1Q15276 862 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 C4orf19Q8IY42 314 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 RNF169Q8NCN4 708 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 NLRP4Q96MN2 994 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 FDXACB1Q9BRP7 624 aaPredicted RBP22.46■■□□□ 1.19
LRCH3-208ENST00000443727 UBE2ZQ9H832 354 aaPredicted RBP22.46■■□□□ 1.19
LRCH3-208ENST00000443727 ALG13Q9NP73 1137 aaKnown RBP22.46■■□□□ 1.19
LRCH3-208ENST00000443727 WRAP73Q9P2S5 460 aaPredicted RBP22.46■■□□□ 1.19
LRCH3-208ENST00000443727 PPME1Q9Y570 386 aa22.46■■□□□ 1.19
LRCH3-208ENST00000443727 RALGAPA2Q2PPJ7 1873 aa22.45■■□□□ 1.19
LRCH3-208ENST00000443727 ST18O60284 1047 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 FGFR1P11362 822 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 BMP1P13497 986 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 SFPQP23246 707 aaKnown RBP eCLIP22.45■■□□□ 1.18
LRCH3-208ENST00000443727 RFC5P40937 340 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 FAM189BP81408 668 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 NAALADL2Q58DX5 795 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 XKR9Q5GH70 373 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 TCEAL5Q5H9L2 206 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 EP400NLQ6ZTU2 488 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 ZNF410Q86VK4 478 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 ABI1Q8IZP0 508 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 P2RX5Q93086 422 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 CCDC43Q96MW1 224 aaKnown RBP22.45■■□□□ 1.18
LRCH3-208ENST00000443727 EIF2AK1Q9BQI3 630 aaKnown RBP22.45■■□□□ 1.18
LRCH3-208ENST00000443727 INO80BQ9C086 356 aaPredicted RBP22.45■■□□□ 1.18
LRCH3-208ENST00000443727 ELAC1Q9H777 363 aaKnown RBP22.45■■□□□ 1.18
LRCH3-208ENST00000443727 AAASQ9NRG9 546 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 PLAGL2Q9UPG8 496 aa22.45■■□□□ 1.18
LRCH3-208ENST00000443727 TNFRSF10AO00220 468 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 WNT7AO00755 349 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 HOXA2O43364 376 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 KCNA5P22460 613 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 KSR1Q8IVT5 923 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 ZNF579Q8NAF0 562 aaKnown RBP22.44■■□□□ 1.18
LRCH3-208ENST00000443727 FOXP1Q9H334 677 aaPredicted RBP22.44■■□□□ 1.18
LRCH3-208ENST00000443727 BMP2KQ9NSY1 1161 aaPredicted RBP22.44■■□□□ 1.18
LRCH3-208ENST00000443727 DACT1Q9NYF0 836 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 PCDHB12Q9Y5F1 795 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 COL4A3BPQ9Y5P4 624 aa22.44■■□□□ 1.18
LRCH3-208ENST00000443727 SLITRK3O94933 977 aa22.43■■□□□ 1.18
LRCH3-208ENST00000443727 KLHL23Q8NBE8 558 aa22.43■■□□□ 1.18
LRCH3-208ENST00000443727 FBXO18Q8NFZ0 1043 aa22.43■■□□□ 1.18
LRCH3-208ENST00000443727 NEK9Q8TD19 979 aa22.43■■□□□ 1.18
LRCH3-208ENST00000443727 PSPC1Q8WXF1 523 aaKnown RBP22.43■■□□□ 1.18
LRCH3-208ENST00000443727 TMEM143Q96AN5 459 aa22.43■■□□□ 1.18
LRCH3-208ENST00000443727 ZBTB39O15060 712 aa22.42■■□□□ 1.18
LRCH3-208ENST00000443727 ITGB1P05556 798 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms