RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ASGR2P07307 311 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 FUT2Q10981 343 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 KIAA1841Q6NSI8 718 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 FRMD5Q7Z6J6 570 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 ZNF598Q86UK7 904 aaKnown RBP16.37■□□□□ 0.21
HMGN1-208ENST00000443046 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 IRAK3Q9Y616 596 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 SLC12A7Q9Y666 1083 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 A0A0U1RQF3 1178 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 FAM86B1E9PN63 330 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 DDX39AO00148 427 aaKnown RBP16.36■□□□□ 0.21
HMGN1-208ENST00000443046 EOMESO95936 686 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 WEE2P0C1S8 567 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 FAM86B2P0C5J1 330 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
HMGN1-208ENST00000443046 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 ZNF710Q8N1W2 664 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 NKD2Q969F2 451 aaPredicted RBP16.36■□□□□ 0.21
HMGN1-208ENST00000443046 LIMD1Q9UGP4 676 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 CNTNAP5Q8WYK1 1306 aa16.36■□□□□ 0.21
HMGN1-208ENST00000443046 CYP3A4P08684 503 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 NPR3P17342 541 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 EIF4BP23588 611 aaKnown RBP16.35■□□□□ 0.21
HMGN1-208ENST00000443046 NAPAP54920 295 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 NLRP11P59045 1033 aaKnown RBP16.35■□□□□ 0.21
HMGN1-208ENST00000443046 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 ABI1Q8IZP0 508 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 METTL13Q8N6R0 699 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 C12orf76Q8N812 135 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-208ENST00000443046 TDRD5Q8NAT2 981 aaKnown RBP16.35■□□□□ 0.21
HMGN1-208ENST00000443046 SLC22A17Q8WUG5 538 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 DZANK1Q9NVP4 752 aa16.35■□□□□ 0.21
HMGN1-208ENST00000443046 IPO5O00410 1097 aaKnown RBP16.34■□□□□ 0.21
HMGN1-208ENST00000443046 MAGEB2O15479 319 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 CXCL14O95715 111 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 ZSCAN20P17040 1043 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-208ENST00000443046 CLCN3P51790 818 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 ADCY7P51828 1080 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 ATAT1Q5SQI0 421 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 RARS2Q5T160 578 aaKnown RBP16.34■□□□□ 0.21
HMGN1-208ENST00000443046 ZNF746Q6NUN9 644 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-208ENST00000443046 KANK3Q6NY19 840 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 FEZF2Q8TBJ5 459 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 ZBP1Q9H171 429 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 BARHL2Q9NY43 387 aa16.34■□□□□ 0.21
HMGN1-208ENST00000443046 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 hCG_1984214I3L0E3 225 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 PI15O43692 258 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 EPCAMP16422 314 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 AOC1P19801 751 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 POLGP54098 1239 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-208ENST00000443046 BCAR1P56945 870 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 EFCAB12Q6NXP0 572 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 TMEM173Q86WV6 379 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-208ENST00000443046 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-208ENST00000443046 ADSSL1Q8N142 457 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 ZNF713Q8N859 430 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-208ENST00000443046 HELQQ8TDG4 1101 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 LSG1Q9H089 658 aaKnown RBP16.33■□□□□ 0.2
HMGN1-208ENST00000443046 GLT8D2Q9H1C3 349 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 MFSD1Q9H3U5 465 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 CYP26B1Q9NR63 512 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 TBC1D22BQ9NU19 505 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 CEP131Q9UPN4 1083 aa16.33■□□□□ 0.2
HMGN1-208ENST00000443046 NT5C1B-RDH14C9J2C7 533 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 SLC27A2O14975 620 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 CTSAP10619 480 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 DARSP14868 501 aaKnown RBP16.32■□□□□ 0.2
HMGN1-208ENST00000443046 ZNF76P36508 570 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 ID4P47928 161 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 ALDH7A1P49419 539 aaKnown RBP16.32■□□□□ 0.2
HMGN1-208ENST00000443046 GIT2Q14161 759 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 DDX53Q86TM3 631 aaKnown RBP16.32■□□□□ 0.2
HMGN1-208ENST00000443046 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 CCDC105Q8IYK2 499 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 VPS52Q8N1B4 723 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 RSPH1Q8WYR4 309 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 TRAIPQ9BWF2 469 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 MRPL9Q9BYD2 267 aaKnown RBP16.32■□□□□ 0.2
HMGN1-208ENST00000443046 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
HMGN1-208ENST00000443046 DBR1Q9UK59 544 aaKnown RBP16.32■□□□□ 0.2
HMGN1-208ENST00000443046 PCDHA10Q9Y5I2 948 aa16.32■□□□□ 0.2
HMGN1-208ENST00000443046 PSAPP07602 524 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 TMOD1P28289 359 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMGN1-208ENST00000443046 GPC3P51654 580 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 BMS1Q14692 1282 aaKnown RBP16.31■□□□□ 0.2
HMGN1-208ENST00000443046 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 AUTS2Q8WXX7 1259 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms