RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SRGAP2CP0DJJ0 459 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 GCFC2P16383 781 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 TWF2Q6IBS0 349 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 CNNM3Q8NE01 707 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 SCLYQ96I15 445 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 TSEN34Q9BSV6 310 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 TTYH3Q9C0H2 523 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 HDAC6Q9UBN7 1215 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 INPP5FQ9Y2H2 1132 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 RBBP6Q7Z6E9 1792 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 SYNRGQ9UMZ2 1314 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 RPS6KA5O75582 802 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 JAK3P52333 1124 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 ADKP55263 362 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 TTC38Q5R3I4 469 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZBTB8OSQ8IWT0 167 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 FAM212AQ96EL1 285 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 BAG1Q99933 345 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 IRX2Q9BZI1 471 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 GBP3Q9H0R5 595 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 BRCA1P38398 1863 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 UBA1P22314 1058 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 ARHGAP29Q52LW3 1261 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 SPATA1Q5VX52 437 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 KIAA1841Q6NSI8 718 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 PSRC1Q6PGN9 363 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 DEPTORQ8TB45 409 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 SNX29Q8TEQ0 813 aa8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 IFIH1Q9BYX4 1025 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-208ENST00000442054 SOWAHDA6NJG2 315 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 EDIL3O43854 480 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 TLL1O43897 1013 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 KLRC4O43908 158 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 MFAP3LO75121 409 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 GHRP10912 638 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 CASP1P29466 404 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 FXR1P51114 621 aaKnown RBP eCLIP8.12□□□□□ -1.115e-6■■■□□ 17.2
CDC42BPA-208ENST00000442054 ACTR2P61160 394 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZBTB33Q86T24 672 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 ADPGKQ9BRR6 497 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 TRMT13Q9NUP7 481 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 LOC102724159A0A0B4J2E5 919 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 CYTH3O43739 400 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 HBP1O60381 514 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 TECP42680 631 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 NOVP48745 357 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 RBL2Q08999 1139 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 TFDP1Q14186 410 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 PWP2Q15269 919 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 CELF3Q5SZQ8 465 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 FAM102BQ5T8I3 360 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 PCNX4Q63HM2 1172 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 PDILTQ8N807 584 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 DHX58Q96C10 678 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 CERS4Q9HA82 394 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 PUF60Q9UHX1 559 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 DNM3Q9UQ16 869 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 CCP110O43303 1012 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 USO1O60763 962 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 SEC31AO94979 1220 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 BMP15O95972 392 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 LGALS2P05162 132 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 SFNP31947 248 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 EXOC8Q8IYI6 725 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 SYMPKQ92797 1274 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 GSDMAQ96QA5 445 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 RPS6KC1Q96S38 1066 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 CARD6Q9BX69 1037 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 JADE2Q9NQC1 790 aa8.12□□□□□ -1.11
CDC42BPA-208ENST00000442054 PLIN4Q96Q06 1357 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 AMHP03971 560 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 SNHG28P0DPA3 235 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 MAGEA10P43363 369 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 PAK2Q13177 524 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 BEND6Q5SZJ8 279 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 DRC1Q96MC2 740 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 SH2D3AQ9BRG2 576 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 OGDHLQ9ULD0 1010 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 H3BQF6 201 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 STXBP3O00186 592 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 FAM13AO94988 1023 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF865P0CJ78 1059 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 STAG3L1P0CL83 205 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 CSF2RAP15509 400 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 SMTNP53814 917 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 GJA9P57773 515 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 HSDL1Q3SXM5 330 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 TAF2Q6P1X5 1199 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 WDR59Q6PJI9 974 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 RHPN2Q8IUC4 686 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 BANK1Q8NDB2 785 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 DNAJB3Q8WWF6 145 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 RABGGTAQ92696 567 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms