RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 DEPTORQ8TB45 409 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SYN2Q92777 582 aaPredicted RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 BICD1Q96G01 975 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SPAG5Q96R06 1193 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 KIAA1586Q9HCI6 787 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 AGPAT3Q9NRZ7 376 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 FAM207AQ9NSI2 230 aaPredicted RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 MYO1AQ9UBC5 1043 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 EPN1Q9Y6I3 576 aaPredicted RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 PARP14Q460N5 1801 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 ASTN1O14525 1302 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 CLIC2O15247 247 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 AKR1B10O60218 316 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 RFX1P22670 979 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 MAPK7Q13164 816 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 ASIC2Q16515 512 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 PTPN21Q16825 1174 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 ZNF467Q7Z7K2 595 aaPredicted RBP6.59□□□□□ -1.35
VPS50-205ENST00000441602 XXYLT1Q8NBI6 393 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 GLG1Q92896 1179 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 POLR3FQ9H1D9 316 aaPredicted RBP6.59□□□□□ -1.35
VPS50-205ENST00000441602 PLCB1Q9NQ66 1216 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 WRAP73Q9P2S5 460 aaPredicted RBP6.59□□□□□ -1.35
VPS50-205ENST00000441602 SIK3Q9Y2K2 1263 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 BZW2Q9Y6E2 419 aaKnown RBP6.59□□□□□ -1.35
VPS50-205ENST00000441602 A0A0G2JMZ2 1700 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 OTOFQ9HC10 1997 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 P4HA2O15460 535 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 KRT86O43790 486 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 ATG7O95352 703 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 GH1P01241 217 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 ANXA13P27216 316 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 CASP5P51878 434 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 NCKAP1LP55160 1127 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 NPEPPSP55786 919 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 GNG11P61952 73 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 GTF2BQ00403 316 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 EMC2Q15006 297 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 UGCGQ16739 394 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 TDRD12Q587J7 1177 aaKnown RBP6.59□□□□□ -1.35
VPS50-205ENST00000441602 PLA2G4FQ68DD2 849 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 PDXDC1Q6P996 788 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 RRAGAQ7L523 313 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 DPP9Q86TI2 863 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 TMEM139Q8IV31 216 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 MYRIPQ8NFW9 859 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 SMARCAD1Q9H4L7 1026 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 HAUS4Q9H6D7 363 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 ADGRG1Q9Y653 693 aa6.59□□□□□ -1.35
VPS50-205ENST00000441602 SOWAHDA6NJG2 315 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 BTBD19C9JJ37 291 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 ZBTB39O15060 712 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 SLC16A4O15374 487 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 LAMC2Q13753 1193 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 TFDP1Q14186 410 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 MEA1Q16626 185 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 ZC2HC1CQ53FD0 456 aaPredicted RBP6.59□□□□□ -1.36
VPS50-205ENST00000441602 SLFN12LQ6IEE8 588 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 PLEKHH3Q7Z736 793 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 CCDC60Q8IWA6 550 aaPredicted RBP6.59□□□□□ -1.36
VPS50-205ENST00000441602 ZBTB8OSQ8IWT0 167 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 MORC4Q8TE76 937 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 AFAP1L1Q8TED9 768 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 BBXQ8WY36 941 aaPredicted RBP6.59□□□□□ -1.36
VPS50-205ENST00000441602 EEF2KMTQ96G04 330 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 FGFBP2Q9BYJ0 223 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 DIS3Q9Y2L1 958 aaKnown RBP6.59□□□□□ -1.36
VPS50-205ENST00000441602 RLFQ13129 1914 aa6.59□□□□□ -1.36
VPS50-205ENST00000441602 COL11A1P12107 1806 aaPredicted RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 DNAJC25-GNG10A0A024R161 153 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 UQCRHLA0A096LP55 91 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 DENND3A2RUS2 1198 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 SLC15A5A6NIM6 579 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 EIF3CLB5ME19 914 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 PPP1R37O75864 691 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 RGS20O76081 388 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 NDUFA10O95299 355 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 UQCRHP07919 91 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 TXNP10599 105 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 GJA5P36382 358 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 HUNKP57058 714 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 INHBEP58166 350 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 MYL7Q01449 175 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 ENPEPQ07075 957 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 MOGSQ13724 837 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 RAPGEF1Q13905 1077 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 CELF3Q5SZQ8 465 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 TRMT1LQ7Z2T5 733 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 FAM81BQ96LP2 452 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 EIF3CQ99613 913 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 NIFKQ9BYG3 293 aaKnown RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 C2orf40Q9H1Z8 148 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 DNAI1Q9UI46 699 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 MAFBQ9Y5Q3 323 aaPredicted RBP6.58□□□□□ -1.36
VPS50-205ENST00000441602 SMCHD1A6NHR9 2005 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 DYNC1I1O14576 645 aa6.58□□□□□ -1.36
VPS50-205ENST00000441602 NKRFO15226 690 aaKnown RBP eCLIP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms