RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PABPC3Q9H361 631 aaKnown RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SUDS3Q9H7L9 328 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 RNPEPL1Q9HAU8 725 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SLCO1B3Q9NPD5 702 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 ARMCX3Q9UH62 379 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 DCTN4Q9UJW0 460 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 HEG1Q9ULI3 1381 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 ARHGAP23Q9P227 1491 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 GSTTP1A0A1W2PQM5 241 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CCDC160A6NGH7 325 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 NVLO15381 856 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 PFDN1O60925 122 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 FAM200BP0CF97 657 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CALB2P22676 271 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CCNFP41002 786 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CACNA2D1P54289 1103 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 NAPAP54920 295 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 MRPS35P82673 323 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 AMPD3Q01432 767 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 RCN1Q15293 331 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 LRRC36Q1X8D7 754 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 SLC5A9Q2M3M2 681 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ECHDC2Q86YB7 292 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 JAMLQ86YT9 394 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 TPCN2Q8NHX9 752 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 FAM81AQ8TBF8 368 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ATP8B4Q8TF62 1192 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CTNNBL1Q8WYA6 563 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 FAM118BQ9BPY3 351 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 MOV10L1Q9BXT6 1211 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 PITPNM3Q9BZ71 974 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ALG13Q9NP73 1137 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CHCHD3Q9NX63 227 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CEP72Q9P209 647 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 PPP1R9AQ9ULJ8 1098 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 CACNA1FO60840 1977 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 MRC1P22897 1456 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 SRRM3A6NNA2 597 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ANKRD63C9JTQ0 380 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 PEX11AO75192 247 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 BAG2O95816 211 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 OR52Z1P0C646 297 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 HNRNPH3P31942 346 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 EIF3BP55884 814 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 SEPT2Q15019 361 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 FIGNQ5HY92 759 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 TAOK1Q7L7X3 1001 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 GLYCTKQ8IVS8 523 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 C4orf32Q8N8J7 132 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 SNX29Q8TEQ0 813 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 DDX12PQ92771 950 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 RAB3IPQ96QF0 476 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 KIAA1683Q9H0B3 1180 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 NT5C3AQ9H0P0 336 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 RANBP17Q9H2T7 1088 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
HDAC9-214ENST00000441542 KCNMB3Q9NPA1 279 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 TMEM260Q9NX78 707 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 COL4A3BPQ9Y5P4 624 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ADAMTS13Q76LX8 1427 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
HDAC9-214ENST00000441542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 KRT36O76013 467 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 UQCRFS1P1P0C7P4 283 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MYBP10242 640 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 SLC5A1P13866 664 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 RPL21P46778 160 aaKnown RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CPA2P48052 419 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 GCLCP48506 637 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MGAT5Q09328 741 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 AUHQ13825 339 aaKnown RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CERKLQ49MI3 558 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 OLFML2BQ68BL8 750 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 CYP4F22Q6NT55 531 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 KIF6Q6ZMV9 814 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ERP44Q9BS26 406 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 IRF2BPLQ9H1B7 796 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PREBQ9HCU5 417 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ARHGEF3Q9NR81 526 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 NKIRAS1Q9NYS0 192 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 WDR35Q9P2L0 1181 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MTRF1LQ9UGC7 380 aaKnown RBP8.1□□□□□ -1.11
HDAC9-214ENST00000441542 NWD2Q9ULI1 1742 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MYH6P13533 1939 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 PIAS1O75925 651 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 TPBGLP0DKB5 382 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 ATP6V1C1P21283 382 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 GSTT1P30711 240 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 GYG1P46976 350 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MARCKSL1P49006 195 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 TMEM62Q0P6H9 643 aa8.1□□□□□ -1.11
HDAC9-214ENST00000441542 MTM1Q13496 603 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms