RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TSG101Q99816 390 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 CCDC134Q9H6E4 229 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 C6orf50Q9HD87 102 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 RIC8AQ9NPQ8 531 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 CORO1CQ9ULV4 474 aaPredicted RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 SNED1Q8TER0 1413 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 COL4A5P29400 1685 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 CAND2O75155 1236 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 POLR2FP61218 127 aaKnown RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 KLHL30Q0D2K2 578 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 HHIPL2Q6UWX4 724 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 LRRC34Q8IZ02 419 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 RASGEF1CQ8N431 466 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 LRRC57Q8N9N7 239 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 PGM2Q96G03 612 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 MOV10L1Q9BXT6 1211 aaKnown RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 ADAMTS1Q9UHI8 967 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 ARFGEF1Q9Y6D6 1849 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 SCN9AQ15858 1988 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 MPHOSPH10O00566 681 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 CYTH3O43739 400 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 RAD21O60216 631 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 SMARCA1P28370 1054 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 NAPAP54920 295 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 MAP2K1Q02750 393 aaPredicted RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 ADCY2Q08462 1091 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 RNF217Q8TC41 542 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 ZDHHC15Q96MV8 337 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 NAV1Q8NEY1 1877 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 MYMKA6NI61 221 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 NUDT17P0C025 328 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 GABPAQ06546 454 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 ASIC2Q16515 512 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 GRIPAP1Q4V328 841 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 ELAC2Q9BQ52 826 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 ADAM7Q9H2U9 754 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 SERPINB13Q9UIV8 391 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 SUGT1Q9Y2Z0 365 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 COL4A3BPQ9Y5P4 624 aa12.9□□□□□ -0.34
LTBR-203ENST00000441074 FRMPD2Q68DX3 1309 aaPredicted RBP12.9□□□□□ -0.34
LTBR-203ENST00000441074 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 EME2A4GXA9 379 aaPredicted RBP12.89□□□□□ -0.35
LTBR-203ENST00000441074 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 USP17L5A8MUK1 530 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 TTI1O43156 1089 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 DIAPH2O60879 1101 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 SHMT1P34896 483 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 PSMD2Q13200 908 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 RAPGEF1Q13905 1077 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 LETM2Q2VYF4 491 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 AP1ARQ63HQ0 302 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
LTBR-203ENST00000441074 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 RARAP10276 462 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 ITGA4P13612 1032 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 PRELPP51888 382 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 NCALDP61601 193 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
LTBR-203ENST00000441074 FMO2Q99518 471 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 SELENOSQ9BQE4 189 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
LTBR-203ENST00000441074 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 CCDC169A6NNP5 214 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
LTBR-203ENST00000441074 ALDH5A1P51649 535 aaPredicted RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 CCNG1P51959 295 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 ZNF131P52739 623 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 KCNJ2P63252 427 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
LTBR-203ENST00000441074 ARID5AQ03989 594 aa12.88□□□□□ -0.35
LTBR-203ENST00000441074 BLMHQ13867 455 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms