RNA–Protein interactions for RNA: ENST00000440827.3

PXN-205, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-205ENST00000440827 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
PXN-205ENST00000440827 DARSP14868 501 aaKnown RBP18■□□□□ 0.47
PXN-205ENST00000440827 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
PXN-205ENST00000440827 SLC24A5Q71RS6 500 aa18■□□□□ 0.47
PXN-205ENST00000440827 NOSTRINQ8IVI9 506 aa18■□□□□ 0.47
PXN-205ENST00000440827 KSR1Q8IVT5 923 aa18■□□□□ 0.47
PXN-205ENST00000440827 C4orf19Q8IY42 314 aa18■□□□□ 0.47
PXN-205ENST00000440827 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
PXN-205ENST00000440827 ZNF689Q96CS4 500 aaPredicted RBP18■□□□□ 0.47
PXN-205ENST00000440827 NLRP4Q96MN2 994 aa18■□□□□ 0.47
PXN-205ENST00000440827 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
PXN-205ENST00000440827 MTMR9Q96QG7 549 aa18■□□□□ 0.47
PXN-205ENST00000440827 JPH2Q9BR39 696 aaPredicted RBP18■□□□□ 0.47
PXN-205ENST00000440827 FDXACB1Q9BRP7 624 aaPredicted RBP18■□□□□ 0.47
PXN-205ENST00000440827 GCOM2Q9BZD3 368 aaPredicted RBP18■□□□□ 0.47
PXN-205ENST00000440827 A0A087WWV3 80 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 IGKV6-21A0A0C4DH24 114 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 SLITRK3O94933 977 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 CSPG5O95196 566 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 TTC38Q5R3I4 469 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 MCTP1Q6DN14 999 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 RNF169Q8NCN4 708 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 CCDC43Q96MW1 224 aaKnown RBP17.99■□□□□ 0.47
PXN-205ENST00000440827 NOL7Q9UMY1 257 aaKnown RBP17.99■□□□□ 0.47
PXN-205ENST00000440827 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 TTC3P53804 2025 aa17.99■□□□□ 0.47
PXN-205ENST00000440827 POTEMA6NI47 508 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 C9IYK1 514 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 H3BNC9 293 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 BMPR1AP36894 532 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 TECP42680 631 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 CDC42EP1Q00587 391 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 PTPROQ16827 1216 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 SPOUT1Q5T280 376 aaKnown RBP17.98■□□□□ 0.47
PXN-205ENST00000440827 FAM102BQ5T8I3 360 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 CMTR2Q8IYT2 770 aaKnown RBP17.98■□□□□ 0.47
PXN-205ENST00000440827 CRIPAKQ8N1N5 446 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 COL25A1Q9BXS0 654 aaPredicted RBP17.98■□□□□ 0.47
PXN-205ENST00000440827 RC3H2Q9HBD1 1191 aaKnown RBP17.98■□□□□ 0.47
PXN-205ENST00000440827 ATP6V0A4Q9HBG4 840 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
PXN-205ENST00000440827 LMCD1Q9NZU5 365 aa17.98■□□□□ 0.47
PXN-205ENST00000440827 MRPL42Q9Y6G3 142 aaKnown RBP17.98■□□□□ 0.47
PXN-205ENST00000440827 PRUNE2Q8WUY3 3088 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 COL4A4P53420 1690 aaPredicted RBP17.97■□□□□ 0.47
PXN-205ENST00000440827 TBKBP1A7MCY6 615 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 SRGAP2CP0DJJ0 459 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 FGFR1P11362 822 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 RFC5P40937 340 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 TFF2Q03403 129 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 DSC3Q14574 896 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 NBR1Q14596 966 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 EXOC8Q8IYI6 725 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 IL27Q8NEV9 243 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
PXN-205ENST00000440827 PRPF31Q8WWY3 499 aaKnown RBP17.97■□□□□ 0.47
PXN-205ENST00000440827 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
PXN-205ENST00000440827 HSD17B14Q9BPX1 270 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
PXN-205ENST00000440827 OR52Z1P0C646 297 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 GJB2P29033 226 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 MCM2P49736 904 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 MRPS5P82675 430 aaKnown RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 EMC2Q15006 297 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 TJAP1Q5JTD0 557 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 FAM43BQ6ZT52 329 aaPredicted RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 NEK9Q8TD19 979 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 PIGOQ8TEQ8 1089 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 PSPC1Q8WXF1 523 aaKnown RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 CLP1Q92989 425 aaKnown RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 ASB2Q96Q27 587 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 C11orf84Q9BUA3 381 aaPredicted RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 INO80BQ9C086 356 aaPredicted RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 DHX33Q9H6R0 707 aaKnown RBP17.96■□□□□ 0.47
PXN-205ENST00000440827 TMEM161AQ9NX61 479 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
PXN-205ENST00000440827 H3BQV1 296 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 GRM6O15303 877 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 RB1P06400 928 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 SFPQP23246 707 aaKnown RBP eCLIP17.95■□□□□ 0.46
PXN-205ENST00000440827 FAM189BP81408 668 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 CATSPER4Q7RTX7 472 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 ZNF410Q86VK4 478 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 TCP11Q8WWU5 503 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 HLA-CQ95604 372 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 MTRQ99707 1265 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 ALG13Q9NP73 1137 aaKnown RBP17.95■□□□□ 0.46
PXN-205ENST00000440827 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 PPME1Q9Y570 386 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 A0A0C4DFX4 3053 aa17.95■□□□□ 0.46
PXN-205ENST00000440827 UNC80Q8N2C7 3258 aa17.94■□□□□ 0.46
PXN-205ENST00000440827 LINC00271P0C7V0 271 aa17.94■□□□□ 0.46
PXN-205ENST00000440827 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.46
PXN-205ENST00000440827 TRAPPC10P48553 1259 aa17.94■□□□□ 0.46
PXN-205ENST00000440827 LAMTOR4Q0VGL1 99 aa17.94■□□□□ 0.46
PXN-205ENST00000440827 TWF2Q6IBS0 349 aaKnown RBP17.94■□□□□ 0.46
PXN-205ENST00000440827 EP400NLQ6ZTU2 488 aa17.94■□□□□ 0.46
PXN-205ENST00000440827 ECHDC2Q86YB7 292 aa17.94■□□□□ 0.46
PXN-205ENST00000440827 ABI1Q8IZP0 508 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms