RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SLC7A3Q8WY07 619 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 CLP1Q92989 425 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 C8orf76Q96K31 380 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 CCDC43Q96MW1 224 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 LXNQ9BS40 222 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 PLVAPQ9BX97 442 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 GCOM2Q9BZD3 368 aaPredicted RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 ADAMTS10Q9H324 1103 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 NSUN3Q9H649 340 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 ATP6V0A4Q9HBG4 840 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 TBKBP1A7MCY6 615 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 TNFRSF10AO00220 468 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 NEMFO60524 1076 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 POLGP54098 1239 aaPredicted RBP22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 GNL2Q13823 731 aaKnown RBP22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 RHPN2Q8IUC4 686 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 FAM184AQ8NB25 1140 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 RNF169Q8NCN4 708 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 HAS1Q92839 578 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 TNFRSF25Q93038 417 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 CEP170P1Q96L14 293 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 ZSCAN31Q96LW9 406 aaPredicted RBP22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 LMAN2LQ9H0V9 348 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 UBE2ZQ9H832 354 aaPredicted RBP22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 UPF2Q9HAU5 1272 aaKnown RBP22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 CYP26B1Q9NR63 512 aa22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 SUCLA2Q9P2R7 463 aaPredicted RBP22.24■■□□□ 1.15
SHROOM1-204ENST00000440118 DARSP14868 501 aaKnown RBP22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 ATP2B1P20020 1258 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 KCNA5P22460 613 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 SFPQP23246 707 aaKnown RBP eCLIP22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 CYP4A11Q02928 519 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 DRP2Q13474 957 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 EPHA7Q15375 998 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 ANO5Q75V66 913 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 ABI1Q8IZP0 508 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 NLRP4Q96MN2 994 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 LLPHQ9BRT6 129 aaKnown RBP22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 SH2B1Q9NRF2 756 aaPredicted RBP22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 AAASQ9NRG9 546 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 TMEM161AQ9NX61 479 aa22.23■■□□□ 1.15
SHROOM1-204ENST00000440118 XIRP2A4UGR9 3374 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 C9IYK1 514 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 GRM6O15303 877 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 HOXA2O43364 376 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 MAFO75444 373 aaPredicted RBP22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 ST3GAL1Q11201 340 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 TCEAL5Q5H9L2 206 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 OTUD6AQ7L8S5 288 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 EXOC8Q8IYI6 725 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 ALG13Q9NP73 1137 aaKnown RBP22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 BMP2KQ9NSY1 1161 aaPredicted RBP22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 PCDHA12Q9UN75 941 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 PCDHB12Q9Y5F1 795 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 PLXNA4Q9HCM2 1894 aa22.22■■□□□ 1.15
SHROOM1-204ENST00000440118 STBD1O95210 358 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 LINC00271P0C7V0 271 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 FGFR1P11362 822 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 FGFR4P22455 802 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 YWHABP31946 246 aaKnown RBP22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 HMGN5P82970 282 aaKnown RBP22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 CTTNQ14247 550 aaKnown RBP22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 FAM102BQ5T8I3 360 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 ZNF410Q86VK4 478 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 TPH2Q8IWU9 490 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 CRIPAKQ8N1N5 446 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 PPP2R3CQ969Q6 453 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 DYDC2Q96IM9 177 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 INO80BQ9C086 356 aaPredicted RBP22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 ZSWIM4Q9H7M6 989 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 DACT1Q9NYF0 836 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 RGL1Q9NZL6 768 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 PPME1Q9Y570 386 aa22.21■■□□□ 1.15
SHROOM1-204ENST00000440118 A0A087WZ62 844 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 BMP1P13497 986 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 RFC5P40937 340 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 TXKP42681 527 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 NPEPPSP55786 919 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 DSC3Q14574 896 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 NAALADL2Q58DX5 795 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 XKR9Q5GH70 373 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 P2RX5Q93086 422 aa22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 NECAB3Q96P71 396 aaPredicted RBP22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 FDXACB1Q9BRP7 624 aaPredicted RBP22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 ELAC1Q9H777 363 aaKnown RBP22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 TTC12Q9H892 705 aaPredicted RBP22.2■■□□□ 1.14
SHROOM1-204ENST00000440118 BDP1A6H8Y1 2624 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 IGKV6-21A0A0C4DH24 114 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 CSDE1O75534 798 aaKnown RBP22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 MCM7P33993 719 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 C4orf19Q8IY42 314 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 KLHL23Q8NBE8 558 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 NEK9Q8TD19 979 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 PSPC1Q8WXF1 523 aaKnown RBP22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 CLDND1Q9NY35 253 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 PLAGL2Q9UPG8 496 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 PIN4Q9Y237 131 aaKnown RBP22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 COL4A3BPQ9Y5P4 624 aa22.19■■□□□ 1.14
SHROOM1-204ENST00000440118 ST18O60284 1047 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 EMC2Q15006 297 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms