RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CASZ1Q86V15 1759 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 DPPA5A6NC42 116 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 FLOT1O75955 427 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 ATP2A2P16615 1042 aaKnown RBP14.48□□□□□ -0.09
ACTN1-204ENST00000438964 PSMC6P62333 389 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 PABPC4Q13310 644 aaKnown RBP eCLIP14.48□□□□□ -0.09
ACTN1-204ENST00000438964 MPP2Q14168 576 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 CNGA2Q16280 664 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 ERFEQ4G0M1 354 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 KIAA1755Q5JYT7 1200 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 AP1ARQ63HQ0 302 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 TTC27Q6P3X3 843 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 RDH13Q8NBN7 331 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 MTMR9Q96QG7 549 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 USP40Q9NVE5 1235 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 TRPM3Q9HCF6 1732 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-204ENST00000438964 CCDC188H7C350 402 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 AKAP3O75969 853 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 TARSP26639 723 aaKnown RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 RFC4P35249 363 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 CTCFP49711 727 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 COPS2P61201 443 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 POU5F1Q01860 360 aaKnown RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 ZNF268Q14587 947 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 LONP2Q86WA8 852 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 C3orf20Q8ND61 904 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 KCNMB3Q9NPA1 279 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 ARMCX3Q9UH62 379 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 MINPP1Q9UNW1 487 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 USP15Q9Y4E8 981 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 SRRM3A6NNA2 597 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 CCDC169A6NNP5 214 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 ASAP2O43150 1006 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 TAL1P17542 331 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 CYP4A11Q02928 519 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 MGAT5Q09328 741 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 AUHQ13825 339 aaKnown RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 SLITRK6Q9H5Y7 841 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 ACP6Q9NPH0 428 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 RIC8AQ9NPQ8 531 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 ALS2Q96Q42 1657 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 PALM3A6NDB9 673 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 KIAA0391O15091 583 aaKnown RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 CETN3O15182 167 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 GNA11P29992 359 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 PCK1P35558 622 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 HP1BP3Q5SSJ5 553 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 DUPD1Q68J44 220 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 ARHGEF2Q92974 986 aaKnown RBP14.47□□□□□ -0.09
ACTN1-204ENST00000438964 COG5Q9UP83 839 aa14.47□□□□□ -0.09
ACTN1-204ENST00000438964 CACNA1SQ13698 1873 aa14.46□□□□□ -0.09
ACTN1-204ENST00000438964 A0A1B0GVG6 124 aa14.46□□□□□ -0.09
ACTN1-204ENST00000438964 PPP1R2P41236 205 aa14.46□□□□□ -0.09
ACTN1-204ENST00000438964 NUCKS1Q9H1E3 243 aaKnown RBP14.46□□□□□ -0.09
ACTN1-204ENST00000438964 STXBP5LQ9Y2K9 1186 aa14.46□□□□□ -0.09
ACTN1-204ENST00000438964 PLA2G4BP0C869 781 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 ITIH4Q14624 930 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 NKX1-1Q15270 411 aaPredicted RBP14.46□□□□□ -0.1
ACTN1-204ENST00000438964 RBM26Q5T8P6 1007 aaKnown RBP14.46□□□□□ -0.1
ACTN1-204ENST00000438964 C12orf60Q5U649 245 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 CAPN12Q6ZSI9 719 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 PHLDB2Q86SQ0 1253 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 DGKHQ86XP1 1220 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 CCDC105Q8IYK2 499 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 SYN2Q92777 582 aaPredicted RBP14.46□□□□□ -0.1
ACTN1-204ENST00000438964 HES6Q96HZ4 224 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 TXLNGYQ9BZA5 131 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 RAB17Q9H0T7 212 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 GRHL1Q9NZI5 618 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 STK17AQ9UEE5 414 aa14.46□□□□□ -0.1
ACTN1-204ENST00000438964 PCNTO95613 3336 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 DDX3YO15523 660 aaKnown RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 SMIM24O75264 130 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 TTC8Q8TAM2 541 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 HAS1Q92839 578 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 CEP95Q96GE4 821 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 KCTD10Q9H3F6 313 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 KCNQ5Q9NR82 932 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 HAO1Q9UJM8 370 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 PLCH1Q4KWH8 1693 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 TRIM49P0CI25 452 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 TRIM49CP0CI26 452 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 POLD1P28340 1107 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 RAD23BP54727 409 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 PTENP60484 403 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 CTTNQ14247 550 aaKnown RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 PLS1Q14651 629 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 SFR1Q86XK3 245 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 DAGLBQ8NCG7 672 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 UTP4Q969X6 686 aaKnown RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 EDEM3Q9BZQ6 932 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 SLAIN2Q9P270 581 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 SUCLA2Q9P2R7 463 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 DDX25Q9UHL0 483 aaKnown RBP14.45□□□□□ -0.1
ACTN1-204ENST00000438964 PCDHA12Q9UN75 941 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 TNS2Q63HR2 1409 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
ACTN1-204ENST00000438964 PFASO15067 1338 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms