RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ASB1Q9Y576 335 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 TOPBP1Q92547 1522 aa4.49□□□□□ -1.69
HMGB1P18-201ENST00000438801 PCNTO95613 3336 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 CAMSAP1Q5T5Y3 1602 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 PRAMEF22A3QJZ6 481 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 NARSO43776 548 aaKnown RBP4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 C1SP09871 688 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 HIBADHP31937 336 aaKnown RBP4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 MCM7P33993 719 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 STAT5BP51692 787 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 HGFACQ04756 655 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 RASA3Q14644 834 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 GRM7Q14831 915 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 FSTL4Q6MZW2 842 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 DEFB132Q7Z7B7 95 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 DNAJC5GQ8N7S2 189 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 GSTCDQ8NEC7 633 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 OR14K1Q8NGZ2 314 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 IL17DQ8TAD2 202 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 SLC7A14Q8TBB6 771 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 CALML6Q8TD86 181 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 MAGEB10Q96LZ2 347 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 HIRIP3Q9BW71 556 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 CELF4Q9BZC1 486 aaKnown RBP4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 TLR9Q9NR96 1032 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 SHANK2Q9UPX8 1470 aa4.48□□□□□ -1.69
HMGB1P18-201ENST00000438801 SLC12A8A0AV02 714 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 RASSF10A6NK89 507 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 E9PSI1 815 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 RASGRP1O95267 797 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 SDHAP31040 664 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 GTF2F1P35269 517 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 HHEXQ03014 270 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 SERINC3Q13530 473 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 TRIM61Q5EBN2 209 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 OVCH1Q7RTY7 1134 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 LRP10Q7Z4F1 713 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 SHCBP1Q8NEM2 672 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 DLG3Q92796 817 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 DEPDC7Q96QD5 511 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 B3GALT1Q9Y5Z6 326 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 NINLQ9Y2I6 1382 aa4.47□□□□□ -1.69
HMGB1P18-201ENST00000438801 A0A0C4DFX4 3053 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 NWD1Q149M9 1564 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 PMS2P1A4D2B8 440 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 FAM221BA6H8Z2 402 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 GOLGA6L22H0YM25 854 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 SLC26A4O43511 780 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 HIP1RO75146 1068 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 TMEM132BQ14DG7 1078 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 ADGRE4PQ86SQ3 457 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 SGMS1Q86VZ5 419 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 AMER2Q8N7J2 671 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 SLC17A8Q8NDX2 589 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 CACTINQ8WUQ7 758 aaKnown RBP4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 TMEM176AQ96HP8 235 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 SCLYQ96I15 445 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 SNTG2Q9NY99 539 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 SFMBT1Q9UHJ3 866 aa4.46□□□□□ -1.7
HMGB1P18-201ENST00000438801 MAFO75444 373 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 KCNA6P17658 529 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 APEX1P27695 318 aaKnown RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 RBM6P78332 1123 aaKnown RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 MAP3K12Q12852 859 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 ADAM15Q13444 863 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 TUBA3CQ13748 450 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 TMEM177Q53S58 311 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 CATSPEREQ5SY80 951 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 TUBA3EQ6PEY2 450 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 BCL6BQ8N143 479 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 D2HGDHQ8N465 521 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 C2orf69Q8N8R5 385 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 ERCC4Q92889 916 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 CHFRQ96EP1 664 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 TRIM8Q9BZR9 551 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 AGO3Q9H9G7 860 aaKnown RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 AURKAIP1Q9NWT8 199 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 GIT1Q9Y2X7 761 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 VWA7Q9Y334 891 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 RNF17Q9BXT8 1623 aaKnown RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 FHOD3Q2V2M9 1422 aa4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 WDR33Q9C0J8 1336 aaKnown RBP4.45□□□□□ -1.7
HMGB1P18-201ENST00000438801 GRIN2AQ12879 1464 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 LRP6O75581 1613 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 CCDC163A0A0D9SF12 145 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 TCRBV16S1A1N1A0A5B0 115 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 TNRC18O15417 2968 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 NPTXRO95502 500 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 IRF9Q00978 393 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 ALDH6A1Q02252 535 aaKnown RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 DPTQ07507 201 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 RBL2Q08999 1139 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 RIN1Q13671 783 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 ABHD17CQ6PCB6 329 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 BRAPQ7Z569 592 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 FGD2Q7Z6J4 655 aa4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 RTN4RL1Q86UN2 441 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P18-201ENST00000438801 THEMISQ8N1K5 641 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms