RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 ARHGEF35A5YM69 484 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 SLC26A4O43511 780 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 TLL1O43897 1013 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 ZSCAN22P10073 491 aaPredicted RBP18.22■□□□□ 0.51
CTSD-205ENST00000438213 DARSP14868 501 aaKnown RBP18.22■□□□□ 0.51
CTSD-205ENST00000438213 CDC25AP30304 524 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 LONP1P36776 959 aaKnown RBP18.22■□□□□ 0.51
CTSD-205ENST00000438213 PBX2P40425 430 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 RABGGTBP53611 331 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 DEFB103AP81534 67 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 FAM173BQ6P4H8 233 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 DEFB123Q8N688 67 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 TOP1MTQ969P6 601 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 CDK5RAP3Q96JB5 506 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 ZNF668Q96K58 619 aaPredicted RBP18.22■□□□□ 0.51
CTSD-205ENST00000438213 RAD9AQ99638 391 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 NT5C3AQ9H0P0 336 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 SLC28A3Q9HAS3 691 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 ERVK-5Q9HDB9 667 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 DDX19AQ9NUU7 478 aaKnown RBP18.22■□□□□ 0.51
CTSD-205ENST00000438213 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
CTSD-205ENST00000438213 COL4A3BPQ9Y5P4 624 aa18.22■□□□□ 0.51
CTSD-205ENST00000438213 A0A087WZ62 844 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.21■□□□□ 0.51
CTSD-205ENST00000438213 PP2D1A8MPX8 630 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 GJB5O95377 273 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 UBA7P41226 1012 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
CTSD-205ENST00000438213 LAMTOR4Q0VGL1 99 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 ECM1Q16610 540 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 MCPH1Q8NEM0 835 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 FDXACB1Q9BRP7 624 aaPredicted RBP18.21■□□□□ 0.51
CTSD-205ENST00000438213 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
CTSD-205ENST00000438213 SEMA6BQ9H3T3 888 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
CTSD-205ENST00000438213 INSL6Q9Y581 213 aa18.21■□□□□ 0.51
CTSD-205ENST00000438213 DENND3A2RUS2 1198 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 USO1O60763 962 aaKnown RBP18.2■□□□□ 0.5
CTSD-205ENST00000438213 UPP2O95045 317 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 SRGAP2CP0DJJ0 459 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 ZSCAN20P17040 1043 aaPredicted RBP18.2■□□□□ 0.5
CTSD-205ENST00000438213 TFDP1Q14186 410 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 PTPAQ15257 358 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 ZRSR1Q15695 479 aaKnown RBP18.2■□□□□ 0.5
CTSD-205ENST00000438213 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
CTSD-205ENST00000438213 FAM117BQ6P1L5 589 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 PADI6Q6TGC4 694 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 SRGAP1Q7Z6B7 1085 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 FAM228AQ86W67 206 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 KSR1Q8IVT5 923 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
CTSD-205ENST00000438213 CALML4Q96GE6 196 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 NLRP4Q96MN2 994 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 MMTAG2Q9BU76 263 aaKnown RBP18.2■□□□□ 0.5
CTSD-205ENST00000438213 BHMT2Q9H2M3 363 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 NKX2-4Q9H2Z4 354 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 XPNPEP1Q9NQW7 623 aa18.2■□□□□ 0.5
CTSD-205ENST00000438213 EYA4O95677 639 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 F13A1P00488 732 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 STAG3L1P0CL83 205 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 CYP11B2P19099 503 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 SFPQP23246 707 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTSD-205ENST00000438213 MARCKSP29966 332 aaPredicted RBP18.19■□□□□ 0.5
CTSD-205ENST00000438213 ARL2P36404 184 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 POU5F1BQ06416 359 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 HYIQ5T013 277 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 RTN4RL1Q86UN2 441 aaPredicted RBP18.19■□□□□ 0.5
CTSD-205ENST00000438213 CABP7Q86V35 215 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 USP28Q96RU2 1077 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 ADAM2Q99965 735 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 ZNF576Q9H609 170 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 C1orf112Q9NSG2 853 aa18.19■□□□□ 0.5
CTSD-205ENST00000438213 YBX2Q9Y2T7 364 aaKnown RBP18.19■□□□□ 0.5
CTSD-205ENST00000438213 SRPRBQ9Y5M8 271 aaKnown RBP18.19■□□□□ 0.5
CTSD-205ENST00000438213 MORC2Q9Y6X9 1032 aaPredicted RBP18.19■□□□□ 0.5
CTSD-205ENST00000438213 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 MYOGP15173 224 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 PHKA2P46019 1235 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 STK38Q15208 465 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 SLC24A5Q71RS6 500 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 MAEAQ7L5Y9 396 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 TMCO2Q7Z6W1 182 aaPredicted RBP18.18■□□□□ 0.5
CTSD-205ENST00000438213 RNF149Q8NC42 400 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 IFT122Q9HBG6 1241 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 CHST12Q9NRB3 414 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
CTSD-205ENST00000438213 TFIP11Q9UBB9 837 aaKnown RBP18.18■□□□□ 0.5
CTSD-205ENST00000438213 E9PMD0 336 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 CA3P07451 260 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
CTSD-205ENST00000438213 FAM102BQ5T8I3 360 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 PPP2R2DQ66LE6 453 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 Q7L0L9 218 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 CATSPER4Q7RTX7 472 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 RASSF8Q8NHQ8 419 aa18.17■□□□□ 0.5
CTSD-205ENST00000438213 YME1L1Q96TA2 773 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms