RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 FLCNQ8NFG4 579 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 FEZF2Q8TBJ5 459 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 HELQQ8TDG4 1101 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 AUTS2Q8WXX7 1259 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 NECTIN4Q96NY8 510 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 AKT3Q9Y243 479 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 EP300Q09472 2414 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-213ENST00000436675 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 CXCL14O95715 111 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 FOSP01100 380 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-213ENST00000436675 FGFR4P22455 802 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 LIFRP42702 1097 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 MTHFRP42898 656 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 ITIH3Q06033 890 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 SLC39A11Q8N1S5 342 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 TDRD5Q8NAT2 981 aaKnown RBP16.82■□□□□ 0.28
HDAC8-213ENST00000436675 MTA3Q9BTC8 594 aa16.82■□□□□ 0.28
HDAC8-213ENST00000436675 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
HDAC8-213ENST00000436675 SMCO2A6NFE2 343 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 FAM86B1E9PN63 330 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
HDAC8-213ENST00000436675 FAM86B2P0C5J1 330 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 SREBF1P36956 1147 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 JAKMIP3Q5VZ66 844 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 FAM43BQ6ZT52 329 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-213ENST00000436675 ADSSL1Q8N142 457 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 LRRC71Q8N4P6 559 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 TMEM87AQ8NBN3 555 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 BBXQ8WY36 941 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-213ENST00000436675 NKD2Q969F2 451 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-213ENST00000436675 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-213ENST00000436675 DCHS1Q96JQ0 3298 aa16.81■□□□□ 0.28
HDAC8-213ENST00000436675 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.8■□□□□ 0.28
HDAC8-213ENST00000436675 IPO5O00410 1097 aaKnown RBP16.8■□□□□ 0.28
HDAC8-213ENST00000436675 SLC27A2O14975 620 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 EPCAMP16422 314 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 BCAR1P56945 870 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 LONRF3Q496Y0 759 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 EFCAB12Q6NXP0 572 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 SCLT1Q96NL6 688 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 TCEAL9Q9UHQ7 104 aa16.8■□□□□ 0.28
HDAC8-213ENST00000436675 CSDE1O75534 798 aaKnown RBP16.79■□□□□ 0.28
HDAC8-213ENST00000436675 ATAT1Q5SQI0 421 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 MCTP2Q6DN12 878 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 TMC5Q6UXY8 1006 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 ZDHHC14Q8IZN3 488 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 VPS52Q8N1B4 723 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 TMEM169Q96HH4 297 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 ZNF577Q9BSK1 485 aa16.79■□□□□ 0.28
HDAC8-213ENST00000436675 MAFBQ9Y5Q3 323 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-213ENST00000436675 IGLV3-22A0A075B6J6 115 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 PI15O43692 258 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 ZC3H11AO75152 810 aaKnown RBP eCLIP16.78■□□□□ 0.28
HDAC8-213ENST00000436675 EIF4BP23588 611 aaKnown RBP16.78■□□□□ 0.28
HDAC8-213ENST00000436675 ID4P47928 161 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 ALDH7A1P49419 539 aaKnown RBP16.78■□□□□ 0.28
HDAC8-213ENST00000436675 CLCN5P51795 746 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 CWF19L1Q69YN2 538 aaKnown RBP16.78■□□□□ 0.28
HDAC8-213ENST00000436675 KIAA1841Q6NSI8 718 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 PPP1R18Q6NYC8 613 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 TMEM173Q86WV6 379 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-213ENST00000436675 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
HDAC8-213ENST00000436675 SAMM50Q9Y512 469 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 CACNA1AO00555 2505 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 DMXL1Q9Y485 3027 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 C2orf16Q68DN1 1984 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 DENND4AQ7Z401 1863 aa16.78■□□□□ 0.28
HDAC8-213ENST00000436675 FRYLO94915 3013 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 ADAMTS3O15072 1205 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 MAGEB2O15479 319 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 EOMESO95936 686 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 PSAPP07602 524 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 TMOD1P28289 359 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 CLK2P49760 499 aaKnown RBP16.77■□□□□ 0.28
HDAC8-213ENST00000436675 BMS1Q14692 1282 aaKnown RBP16.77■□□□□ 0.28
HDAC8-213ENST00000436675 RTN1Q16799 776 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 CREB3L3Q68CJ9 461 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 ZNF598Q86UK7 904 aaKnown RBP16.77■□□□□ 0.28
HDAC8-213ENST00000436675 PLCD3Q8N3E9 789 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 LPPQ93052 612 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 ZBP1Q9H171 429 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 DZANK1Q9NVP4 752 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
HDAC8-213ENST00000436675 A0A0U1RQF3 1178 aa16.76■□□□□ 0.27
HDAC8-213ENST00000436675 DARSP14868 501 aaKnown RBP16.76■□□□□ 0.27
HDAC8-213ENST00000436675 FUT2Q10981 343 aa16.76■□□□□ 0.27
HDAC8-213ENST00000436675 ZNF746Q6NUN9 644 aaPredicted RBP16.76■□□□□ 0.27
HDAC8-213ENST00000436675 APOA5Q6Q788 366 aa16.76■□□□□ 0.27
HDAC8-213ENST00000436675 CABP7Q86V35 215 aa16.76■□□□□ 0.27
HDAC8-213ENST00000436675 SGMS1Q86VZ5 419 aa16.76■□□□□ 0.27
HDAC8-213ENST00000436675 LINC01465Q8N7H1 131 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms