RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 C9IYK1 514 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 SPATA31C1P0DKV0 1188 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 XRCC6P12956 609 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■□□□□ 11.3
EXT1-202ENST00000436216 GJB2P29033 226 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 RFC5P40937 340 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 SARSP49591 514 aaKnown RBP13.86□□□□□ -0.19
EXT1-202ENST00000436216 CYP4A11Q02928 519 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 GRB10Q13322 594 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
EXT1-202ENST00000436216 SLC24A5Q71RS6 500 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 CLP1Q92989 425 aaKnown RBP13.86□□□□□ -0.19
EXT1-202ENST00000436216 ADAM2Q99965 735 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 C1orf112Q9NSG2 853 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 ANKEF1Q9NU02 776 aa13.86□□□□□ -0.19
EXT1-202ENST00000436216 SUCLA2Q9P2R7 463 aaPredicted RBP13.86□□□□□ -0.19
EXT1-202ENST00000436216 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
EXT1-202ENST00000436216 POTEMA6NI47 508 aa13.85□□□□□ -0.19
EXT1-202ENST00000436216 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
EXT1-202ENST00000436216 STAG3L1P0CL83 205 aa13.85□□□□□ -0.19
EXT1-202ENST00000436216 EPC2Q52LR7 807 aa13.85□□□□□ -0.19
EXT1-202ENST00000436216 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.85□□□□□ -0.19
EXT1-202ENST00000436216 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
EXT1-202ENST00000436216 TUFT1Q9NNX1 390 aa13.85□□□□□ -0.19
EXT1-202ENST00000436216 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
EXT1-202ENST00000436216 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
EXT1-202ENST00000436216 GTF3C3Q9Y5Q9 886 aa13.85□□□□□ -0.19
EXT1-202ENST00000436216 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
EXT1-202ENST00000436216 PRRC2BQ5JSZ5 2229 aaKnown RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 A0A087WZ62 844 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 C5orf67F2Z3F1 127 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 GTPBP6O43824 516 aaPredicted RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 TECP42680 631 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
EXT1-202ENST00000436216 POLGP54098 1239 aaPredicted RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 NBR1Q14596 966 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 XKR9Q5GH70 373 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 CATSPER3Q86XQ3 398 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 RHPN2Q8IUC4 686 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 TMEM192Q8IY95 271 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 ZNF668Q96K58 619 aaPredicted RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 GCOM2Q9BZD3 368 aaPredicted RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 ELAC1Q9H777 363 aaKnown RBP13.84□□□□□ -0.19
EXT1-202ENST00000436216 IFT122Q9HBG6 1241 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 SMC3Q9UQE7 1217 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 PCDHB6Q9Y5E3 794 aa13.84□□□□□ -0.19
EXT1-202ENST00000436216 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
EXT1-202ENST00000436216 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 H3BNC9 293 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 ASAP2O43150 1006 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 MED24O75448 989 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 RB1P06400 928 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 MUTP22033 750 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 RPA1P27694 616 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 BMPR1AP36894 532 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 RARRES1P49788 294 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 PTGDRQ13258 359 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 BTG3Q14201 252 aaPredicted RBP13.83□□□□□ -0.2
EXT1-202ENST00000436216 PDIA5Q14554 519 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 EMC2Q15006 297 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 KSR1Q8IVT5 923 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 FBXO22Q8NEZ5 403 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 GDPD5Q8WTR4 605 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 TCP11Q8WWU5 503 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 PSPC1Q8WXF1 523 aaKnown RBP13.83□□□□□ -0.2
EXT1-202ENST00000436216 TMEM143Q96AN5 459 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 TRAIPQ9BWF2 469 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 INO80BQ9C086 356 aaPredicted RBP13.83□□□□□ -0.2
EXT1-202ENST00000436216 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.83□□□□□ -0.2
EXT1-202ENST00000436216 CHST12Q9NRB3 414 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 TMEM161AQ9NX61 479 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 PCDHB7Q9Y5E2 793 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 ARID2Q68CP9 1835 aa13.83□□□□□ -0.2
EXT1-202ENST00000436216 RALGAPA2Q2PPJ7 1873 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 A0A0U1RQF3 1178 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 LAD1O00515 517 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
EXT1-202ENST00000436216 DGAT1O75907 488 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
EXT1-202ENST00000436216 FGFR4P22455 802 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 PRPHP41219 470 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 LAMTOR4Q0VGL1 99 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 CCDC85BQ15834 202 aaPredicted RBP13.82□□□□□ -0.2
EXT1-202ENST00000436216 RILPL1Q5EBL4 403 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 LARP1BQ659C4 914 aaKnown RBP13.82□□□□□ -0.2
EXT1-202ENST00000436216 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 IGSF22Q8N9C0 903 aa13.82□□□□□ -0.2
EXT1-202ENST00000436216 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms