RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 S1PR5Q9H228 398 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PLXNA4Q9HCM2 1894 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MSH4O15457 936 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 DARSP14868 501 aaKnown RBP12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 IFNAR1P17181 557 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PPM1AP35813 382 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NLRP11P59045 1033 aaKnown RBP12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 EFCAB12Q6NXP0 572 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TRIM67Q6ZTA4 783 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ZNF598Q86UK7 904 aaKnown RBP12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ALYREFQ86V81 257 aaKnown RBP12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 LRRC71Q8N4P6 559 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 BICD2Q8TD16 824 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MFSD14AQ96MC6 490 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TCF25Q9BQ70 676 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 DISC1Q9NRI5 854 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TCEAL9Q9UHQ7 104 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 AKT3Q9Y243 479 aa12.38□□□□□ -0.43
SPTLC1P4-201ENST00000435997 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 M0R2N6 131 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PSMD10O75832 226 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 STBD1O95210 358 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SFNP31947 248 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MRE11P49959 708 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 USP11P51784 963 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 JAK3P52333 1124 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ZXDAP98168 799 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 FGD1P98174 961 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SYCE2Q6PIF2 218 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 BLOC1S2Q6QNY1 142 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SLC39A11Q8N1S5 342 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 RDM1Q8NG50 284 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ASIC4Q96FT7 647 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TRAIPQ9BWF2 469 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 VPS54Q9P1Q0 977 aa12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NAP1L2Q9ULW6 460 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CYP3A7-CYP3A51PA0A087WV96 503 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 IGKV6-21A0A0C4DH24 114 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 HIDE1A8MVS5 230 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 M0R296 226 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 GAS7O60861 476 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CYP3A7P24462 503 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TMOD1P28289 359 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PDIA3P30101 505 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PBX3P40426 434 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 DRP2Q13474 957 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NPY5RQ15761 445 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 Q4G0T1 1027 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PLPP4Q5VZY2 271 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TRMT1LQ7Z2T5 733 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PRSS33Q8NF86 280 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MBOAT7Q96N66 472 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NIFKQ9BYG3 293 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SAMM50Q9Y512 469 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 LOXHD1Q8IVV2 1947 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TRIOO75962 3097 aa12.36□□□□□ -0.43
SPTLC1P4-201ENST00000435997 EOMESO95936 686 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SRGAP2BP0DMP2 458 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ZSCAN20P17040 1043 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 HOXB8P17481 243 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MOXD1Q6UVY6 613 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 DAGLBQ8NCG7 672 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 GJA10Q969M2 543 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
SPTLC1P4-201ENST00000435997 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CHMP2AO43633 222 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TDP2O95551 362 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TECP42680 631 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 AKAP17AQ02040 695 aaKnown RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TOB2Q14106 344 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PTPN21Q16825 1174 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 IER5LQ5T953 404 aa12.34□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TMEM173Q86WV6 379 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms