RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 MYCLP12524 364 aaPredicted RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 KRT76Q01546 638 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 GPS2Q13227 327 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 ENOX2Q16206 610 aaKnown RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 ARHGEF16Q5VV41 709 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 NFRKBQ6P4R8 1299 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 ZNF571Q7Z3V5 609 aaPredicted RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 C4orf19Q8IY42 314 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 MMGT1Q8N4V1 131 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 RUBCNQ92622 972 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 TLR10Q9BXR5 811 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 IKZF4Q9H2S9 585 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 RNF146Q9NTX7 359 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 RNF14Q9UBS8 474 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 WDR64B1ANS9 1081 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 EXOC3O60645 756 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 EIF3JO75822 258 aaKnown RBP18.25■□□□□ 0.51
LIMK1-203ENST00000435201 PLS3P13797 630 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 KLRC1P26715 233 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 YWHABP31946 246 aaKnown RBP18.25■□□□□ 0.51
LIMK1-203ENST00000435201 STAT1P42224 750 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 PSMC5P62195 406 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 TERF2Q15554 542 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 CCDC181Q5TID7 509 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 SLC17A8Q8NDX2 589 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 RDM1Q8NG50 284 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 COG1Q8WTW3 980 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 C12orf42Q96LP6 360 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 CD2APQ9Y5K6 639 aa18.25■□□□□ 0.51
LIMK1-203ENST00000435201 GFPT2O94808 682 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 PAFAH1B1P43034 410 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 SNRPFP62306 86 aaKnown RBP18.24■□□□□ 0.51
LIMK1-203ENST00000435201 BFSP1Q12934 665 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 IFI16Q16666 785 aaKnown RBP18.24■□□□□ 0.51
LIMK1-203ENST00000435201 C12orf56Q8IXR9 622 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 ST6GALNAC4Q9H4F1 302 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 ST7Q9NRC1 585 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 COL11A1P12107 1806 aaPredicted RBP18.24■□□□□ 0.51
LIMK1-203ENST00000435201 RLFQ13129 1914 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 PALMO75781 387 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 KRT13P13646 458 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 PTPRAP18433 802 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 RFX1P22670 979 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 CCND2P30279 289 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 C2orf54Q08AI8 447 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 IWS1Q96ST2 819 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 STK33Q9BYT3 514 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 ANKEF1Q9NU02 776 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 NAGPAQ9UK23 515 aa18.24■□□□□ 0.51
LIMK1-203ENST00000435201 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 MAFGO15525 162 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 NCK2O43639 380 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 OAS2P29728 719 aaKnown RBP18.23■□□□□ 0.51
LIMK1-203ENST00000435201 MYL7Q01449 175 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 INTS8Q75QN2 995 aaKnown RBP18.23■□□□□ 0.51
LIMK1-203ENST00000435201 SPATA4Q8NEY3 305 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 REPS2Q8NFH8 660 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 PACSIN1Q9BY11 444 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 ACBD3Q9H3P7 528 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
LIMK1-203ENST00000435201 AJAP1Q9UKB5 411 aaPredicted RBP18.23■□□□□ 0.51
LIMK1-203ENST00000435201 NENFQ9UMX5 172 aa18.23■□□□□ 0.51
LIMK1-203ENST00000435201 TESPA1A2RU30 521 aaPredicted RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CCDC172P0C7W6 258 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 BAATQ14032 418 aaPredicted RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 ZNF746Q6NUN9 644 aaPredicted RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 ALKBH5Q6P6C2 394 aaKnown RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 MAEAQ7L5Y9 396 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 NLRX1Q86UT6 975 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 MAF1Q9H063 256 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 INTUQ9ULD6 942 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 F8VZ95 297 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 MAPK13O15264 365 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 ATP9AO75110 1047 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 N4BP1O75113 896 aaKnown RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 DSG3P32926 999 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 SOX5P35711 763 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 GTF2BQ00403 316 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CASP8Q14790 479 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 UGCGQ16739 394 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CBWD6Q4V339 395 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CBWD3Q5JTY5 395 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CBWD5Q5RIA9 395 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 MEI1Q5TIA1 1274 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 VSIG10LQ86VR7 867 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 SENP7Q9BQF6 1050 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 INTS2Q9H0H0 1204 aaKnown RBP18.22■□□□□ 0.51
LIMK1-203ENST00000435201 APEX2Q9UBZ4 518 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 ADAMTS5Q9UNA0 930 aa18.22■□□□□ 0.51
LIMK1-203ENST00000435201 BACH1O14867 736 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms