RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 PAGR1Q9BTK6 254 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 PCDHA12Q9UN75 941 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 IGF2BP3O00425 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 ZBTB48P10074 688 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 GNA11P29992 359 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 HOXD13P35453 343 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 ZC2HC1CQ53FD0 456 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 TBC1D9BQ66K14 1250 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 SFR1Q86XK3 245 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 RSRC1Q96IZ7 334 aaKnown RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 ZNF317Q96PQ6 595 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 CRAMP1Q96RY5 1269 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 FAM129AQ9BZQ8 928 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 GCNT4Q9P109 453 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 PVALEFA0A1B0GWK0 134 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 MGRN1O60291 552 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 FGFR1OPO95684 399 aaKnown RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 KRT16P08779 473 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 DR1Q01658 176 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 NFIXQ14938 502 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 RPGRQ92834 1020 aaKnown RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 ZNF570Q96NI8 536 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 THAP2Q9H0W7 228 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
SCAF4-203ENST00000434667 A1CFQ9NQ94 594 aaKnown RBP11.34□□□□□ -0.59
SCAF4-203ENST00000434667 LOC102724428A0A0B4J2F2 783 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 LAD1O00515 517 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 RGS16O15492 202 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 C21orf2O43822 256 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 H2AFZP0C0S5 128 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 SIK1P57059 783 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 RPS8P62241 208 aaKnown RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 XRCC4Q13426 336 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 SNX1Q13596 522 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 CUL1Q13616 776 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 H2AFVQ71UI9 128 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 ATXN2LQ8WWM7 1075 aaKnown RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 COG5Q9UP83 839 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 PSME4Q14997 1843 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 TCP11X1B4DZS4 312 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 PCK1P35558 622 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 ADCY7P51828 1080 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 PMS2P54278 862 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 LRIG3Q6UXM1 1119 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 DAGLBQ8NCG7 672 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 YIPF3Q9GZM5 350 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 USP40Q9NVE5 1235 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 HP1BP3Q5SSJ5 553 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 EMC10Q5UCC4 262 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 TTC27Q6P3X3 843 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 FAM47EQ6ZV65 393 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 ACTRT1Q8TDG2 376 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
SCAF4-203ENST00000434667 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 ATXN2Q99700 1313 aaKnown RBP11.33□□□□□ -0.6
SCAF4-203ENST00000434667 A6NNZ2 444 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 EVI5O60447 810 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 CYP11B2P19099 503 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 RPL21P46778 160 aaKnown RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 GNAQP50148 359 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 BIRC3Q13489 604 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 TUBB8Q3ZCM7 444 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 DPY19L2P1Q6NXN4 242 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 CYP2W1Q8TAV3 490 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 PIGOQ8TEQ8 1089 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 PCDHA2Q9Y5H9 948 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 CETN3O15182 167 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 MAP3K13O43283 966 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 YY1P25490 414 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 SEPT7Q16181 437 aaKnown RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 DENND2CQ68D51 928 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 ZDHHC24Q6UX98 284 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 SLC20A1Q8WUM9 679 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 RUBCNQ92622 972 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 SH2D3AQ9BRG2 576 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 TRIM6Q9C030 488 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 CPSF2Q9P2I0 782 aaKnown RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 KCNG1Q9UIX4 513 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 DAAM1Q9Y4D1 1078 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 C10orf71Q711Q0 1435 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 C5orf60A6NFR6 353 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 PIAS1O75925 651 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 BTDP43251 543 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 FAM182BQ5T319 152 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 NSMFQ6X4W1 530 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 TAB3Q8N5C8 712 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-203ENST00000434667 ZCWPW1Q9H0M4 648 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms