RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FBXW10Q5XX13 1052 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 GMCL1P1Q8NEA9 526 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 PAGR1Q9BTK6 254 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 GLT8D2Q9H1C3 349 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 CNOT7Q9UIV1 285 aaKnown RBP16.96■□□□□ 0.31
SCARF1-203ENST00000434376 HACL1Q9UJ83 578 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 DNAJC12Q9UKB3 198 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 GOLGA6BA6NDN3 693 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 SERPING1P05155 500 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 DRAP1Q14919 205 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-203ENST00000434376 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 IQCEQ6IPM2 695 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 TLR10Q9BXR5 811 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 DPH5Q9H2P9 285 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 UBE2TQ9NPD8 197 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-203ENST00000434376 MED4Q9NPJ6 270 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 PIM2Q9P1W9 311 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 SMIM23A6NLE4 172 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 EBAG9O00559 213 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
SCARF1-203ENST00000434376 RTKN2Q8IZC4 609 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 PI4K2AQ9BTU6 479 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 TAS2R14Q9NYV8 317 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 CREG2Q8IUH2 290 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 SLC35C1Q96A29 364 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 DDX47Q9H0S4 455 aaKnown RBP16.95■□□□□ 0.3
SCARF1-203ENST00000434376 MYH4Q9Y623 1939 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 ERLIN2O94905 339 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 NF2P35240 595 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 BAG6P46379 1132 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 CKAP4Q07065 602 aaKnown RBP16.95■□□□□ 0.3
SCARF1-203ENST00000434376 SNRNP48Q6IEG0 339 aaKnown RBP16.95■□□□□ 0.3
SCARF1-203ENST00000434376 AADACL2Q6P093 401 aa16.95■□□□□ 0.3
SCARF1-203ENST00000434376 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 EVI5O60447 810 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 CYP3A4P08684 503 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 GNGT1P63211 74 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 ITGB3BPQ13352 177 aaPredicted RBP16.94■□□□□ 0.3
SCARF1-203ENST00000434376 TNIP1Q15025 636 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
SCARF1-203ENST00000434376 ZFYVE27Q5T4F4 411 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 KLHDC7AQ5VTJ3 777 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 SEPT14Q6ZU15 432 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 SELENOOQ9BVL4 669 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 TYW1Q9NV66 732 aaKnown RBP16.94■□□□□ 0.3
SCARF1-203ENST00000434376 TMOD4Q9NZQ9 345 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 PSMD10O75832 226 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 CARSP49589 748 aaKnown RBP16.94■□□□□ 0.3
SCARF1-203ENST00000434376 CORO7P57737 925 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
SCARF1-203ENST00000434376 SH2D3CQ8N5H7 860 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 BTBD6Q96KE9 485 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 HPCAL4Q9UM19 191 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 EMSYQ7Z589 1322 aa16.94■□□□□ 0.3
SCARF1-203ENST00000434376 SYF2O95926 243 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 VCAM1P19320 739 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 PRPF38AQ8NAV1 312 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 SLC20A1Q8WUM9 679 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 HEXIM1O94992 359 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 PSMC2P35998 433 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 SSR1P43307 286 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 MKRN3Q13064 507 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 PEX26Q7Z412 305 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 TADA2BQ86TJ2 420 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 NAP1L4Q99733 375 aaKnown RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 KRT13P13646 458 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 MARK3P27448 753 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 STAT1P42224 750 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 RPS6KA1Q15418 735 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 MTERF2Q49AM1 385 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 Q4G0T1 1027 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 CDR2LQ86X02 465 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-203ENST00000434376 TSGA10Q9BZW7 698 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 AGPAT3Q9NRZ7 376 aa16.93■□□□□ 0.3
SCARF1-203ENST00000434376 MRPS9P82933 396 aaKnown RBP16.92■□□□□ 0.3
SCARF1-203ENST00000434376 SLC18A3Q16572 532 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 FAM182AQ5T1J6 154 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-203ENST00000434376 SWSAP1Q6NVH7 229 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 C1orf186Q6ZWK4 172 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 CPNE8Q86YQ8 564 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 PPP1R13LQ8WUF5 828 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 CEP170P1Q96L14 293 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 CEP63Q96MT8 703 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 CELF4Q9BZC1 486 aaKnown RBP16.92■□□□□ 0.3
SCARF1-203ENST00000434376 LUC7LQ9NQ29 371 aaKnown RBP16.92■□□□□ 0.3
SCARF1-203ENST00000434376 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 GLI1P08151 1106 aa16.92■□□□□ 0.3
SCARF1-203ENST00000434376 FAM153BP0C7A2 387 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms