RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 USP17L8P0C7I0 530 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 STAT3P40763 770 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 EPHA10Q5JZY3 1008 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KLHL10Q6JEL2 608 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CEP120Q8N960 986 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TMEM47Q9BQJ4 181 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TMEM109Q9BVC6 243 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 OSBPL10Q9BXB5 764 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MRPL44Q9H9J2 332 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TTC4O95801 387 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CNTFP26441 200 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 HAND2P61296 217 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CCDC144BQ3MJ40 725 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 HSP90AA5PQ58FG0 334 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 EMC10Q5UCC4 262 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SLFN13Q68D06 897 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FBXL13Q8NEE6 735 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TRAIPQ9BWF2 469 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KLHL14Q9P2G3 628 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 RCOR3Q9P2K3 495 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 NCANO14594 1321 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TCEA3O75764 348 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ECEL1O95672 775 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MARCKSP29966 332 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ATICP31939 592 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SERPINB6P35237 376 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SKIV2L2P42285 1042 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FAM47CQ5HY64 1035 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TOGARAM2Q6ZUX3 1019 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CENPTQ96BT3 561 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MTRQ99707 1265 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 AP1M1Q9BXS5 423 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PUS7LQ9H0K6 701 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ARMT1Q9H993 441 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PLEKHA5Q9HAU0 1116 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KCNMB3Q9NPA1 279 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ITGB1BP2Q9UKP3 347 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 COL1A2P08123 1366 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ASB14A6NK59 587 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TMEM253P0C7T8 217 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CCND2P30279 289 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ADD1P35611 737 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ECE1P42892 770 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KNOP1Q1ED39 458 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CATSPER1Q8NEC5 780 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CDKL2Q92772 493 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CABS1Q96KC9 395 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FANCLQ9NW38 375 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 GUCA1BQ9UMX6 200 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CTNND2Q9UQB3 1225 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CNOT1A5YKK6 2376 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 HNRNPDLO14979 420 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SLC2A3P11169 496 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CYP2C18P33260 490 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CDK18Q07002 472 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MCM6Q14566 821 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SYDE2Q5VT97 1194 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 JAMLQ86YT9 394 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 EFHBQ8N7U6 833 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PROCA1Q8NCQ7 364 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SHCBP1Q8NEM2 672 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF560Q96MR9 790 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FMO2Q99518 471 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ADPGKQ9BRR6 497 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 DNAAF2Q9NVR5 837 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 GPTP24298 496 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CTNNA2P26232 953 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PHKA2P46019 1235 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 DNAJC3Q13217 504 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 BIRC2Q13490 618 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SYCP2LQ5T4T6 812 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TCERG1LQ5VWI1 586 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ITPRIPL1Q6GPH6 555 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FASTKD5Q7L8L6 764 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SETD3Q86TU7 594 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 OXCT2Q9BYC2 517 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PANK2Q9BZ23 570 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 BCL2L12Q9HB09 334 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SLC38A7Q9NVC3 462 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ICAM1P05362 532 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CA4P22748 312 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CEBPZQ03701 1054 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 C1QBPQ07021 282 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 EPHA7Q15375 998 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MIER3Q7Z3K6 550 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 NECAB1Q8N987 351 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 C12orf50Q8NA57 414 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 DYDC1Q8WWB3 177 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CYP3A43Q9HB55 503 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 RPTORQ8N122 1335 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CYP2C9P11712 490 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SKIP12755 728 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 DDX5P17844 614 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PLCG1P19174 1290 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CDK8P49336 464 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 RAB27AP51159 221 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PRELPP51888 382 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 HLTFQ14527 1009 aaKnown RBP eCLIP4.05□□□□□ -1.763e-6■■□□□ 13
SHPRH-205ENST00000433355 TMEM119Q4V9L6 283 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CC2D1AQ6P1N0 951 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms