RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CTNNBL1Q8WYA6 563 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 CEP63Q96MT8 703 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 TMEM237Q96Q45 408 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 LRRC27Q9C0I9 530 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 KLHL14Q9P2G3 628 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 CTNNAL1Q9UBT7 734 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 KCPQ6ZWJ8 1503 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 CAMTA1Q9Y6Y1 1673 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 KIAA0391O15091 583 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 STX2P32856 288 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 POU5F1Q01860 360 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 ICA1Q05084 483 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 DCAF12L1Q5VU92 463 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 ARMC3Q5W041 872 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 DNAJC19Q96DA6 116 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 HES6Q96HZ4 224 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 STMN4Q9H169 189 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 PAPOLBQ9NRJ5 636 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 ATP8A2Q9NTI2 1148 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 ARL2BPQ9Y2Y0 163 aa12.48□□□□□ -0.41
HMGCS1-202ENST00000433297 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 CLIC2O15247 247 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 ALADP13716 330 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 GBP1P32455 592 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 TXLNGYQ9BZA5 131 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 PPP1R12CQ9BZL4 782 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 ARHGEF3Q9NR81 526 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 IRAK4Q9NWZ3 460 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 STXBP5LQ9Y2K9 1186 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 FRMPD2Q68DX3 1309 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 KLHL33A6NCF5 533 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 MAPK7Q13164 816 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 ZNF449Q6P9G9 518 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 ZNF34Q8IZ26 560 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 GBP7Q8N8V2 638 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 SEC14L1Q92503 715 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 CNKSR1Q969H4 720 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 FAM84BQ96KN1 310 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 TGS1Q96RS0 853 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 PIDD1Q9HB75 910 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 GLI3P10071 1580 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 BTNL10A8MVZ5 291 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 PAPOLAP51003 745 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 SEPT2Q15019 361 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 GCNT4Q9P109 453 aa12.47□□□□□ -0.41
HMGCS1-202ENST00000433297 RIPK2O43353 540 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 UBE2SQ16763 222 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 ALG3Q92685 438 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 BHMG1C9JSJ3 638 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 ZBTB48P10074 688 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 TARSP26639 723 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 STAT1P42224 750 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 TUBP50607 506 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 CASP5P51878 434 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 POLE2P56282 527 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 CCDC137Q6PK04 289 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 HAO1Q9UJM8 370 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 IGSF9BQ9UPX0 1349 aa12.46□□□□□ -0.41
HMGCS1-202ENST00000433297 POTEB3A0JP26 581 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 PALM3A6NDB9 673 aaPredicted RBP12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 POTECB2RU33 542 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 IRF6O14896 467 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 BRAFP15056 766 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 GALNTL6Q49A17 601 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 TMEM154Q6P9G4 183 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 POTEBQ6S5H4 581 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 SLFN11Q7Z7L1 901 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 TEKT4Q8WW24 435 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 ARHGEF26Q96DR7 871 aa12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 POP1Q99575 1024 aaKnown RBP12.46□□□□□ -0.42
HMGCS1-202ENST00000433297 LGR5O75473 907 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 PLA2G4BP0C869 781 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 CASP4P49662 377 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 NUDCD1Q96RS6 583 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 THAP2Q9H0W7 228 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 MYH1P12882 1939 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 MYH4Q9Y623 1939 aa12.45□□□□□ -0.42
HMGCS1-202ENST00000433297 ANKRD63C9JTQ0 380 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms