RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 TERF2Q15554 542 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 NLGN2Q8NFZ4 835 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 RPS12P25398 132 aaKnown RBP16.03■□□□□ 0.16
RFTN1-203ENST00000432519 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
RFTN1-203ENST00000432519 R3HDM1Q15032 1099 aaKnown RBP16.03■□□□□ 0.16
RFTN1-203ENST00000432519 NAB2Q15742 525 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
RFTN1-203ENST00000432519 CBWD1Q9BRT8 395 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 MTFR1LQ9H019 292 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 N4BP1O75113 896 aaKnown RBP16.02■□□□□ 0.16
RFTN1-203ENST00000432519 MUTP22033 750 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 YWHABP31946 246 aaKnown RBP16.02■□□□□ 0.16
RFTN1-203ENST00000432519 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
RFTN1-203ENST00000432519 FMO5P49326 533 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 NOX5Q96PH1 765 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 SEL1LQ9UBV2 794 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 DOCK5Q9H7D0 1870 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 LRRIQ3A6PVS8 624 aaPredicted RBP16.02■□□□□ 0.16
RFTN1-203ENST00000432519 RGS20O76081 388 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 GFPT2O94808 682 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.16
RFTN1-203ENST00000432519 HS2ST1Q7LGA3 356 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 SYCP3Q8IZU3 236 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
RFTN1-203ENST00000432519 WDR93Q6P2C0 686 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 ZNF280CQ8ND82 737 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 ALS2CR12Q96Q35 445 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 GPR88Q9GZN0 384 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.02■□□□□ 0.15
RFTN1-203ENST00000432519 KCND2Q9NZV8 630 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.15
RFTN1-203ENST00000432519 NAGPAQ9UK23 515 aa16.02■□□□□ 0.15
RFTN1-203ENST00000432519 GRID2IPA4D2P6 1211 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 ATP8B1O43520 1251 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 ZBED4O75132 1171 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
RFTN1-203ENST00000432519 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 SNRNP48Q6IEG0 339 aaKnown RBP16.01■□□□□ 0.15
RFTN1-203ENST00000432519 SPATA4Q8NEY3 305 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 PLEKHO2Q8TD55 490 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 LRRC1Q9BTT6 524 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 PDE11AQ9HCR9 933 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 ZNF214Q9UL59 606 aaPredicted RBP16.01■□□□□ 0.15
RFTN1-203ENST00000432519 EXOC3O60645 756 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 RNASE9P60153 205 aaKnown RBP16.01■□□□□ 0.15
RFTN1-203ENST00000432519 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 SP4Q02446 784 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 NFIL3Q16649 462 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 PLEKHA4Q9H4M7 779 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 HYOU1Q9Y4L1 999 aa16.01■□□□□ 0.15
RFTN1-203ENST00000432519 DOCK1Q14185 1865 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
RFTN1-203ENST00000432519 KIAA1217Q5T5P2 1943 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 DDX3XO00571 662 aaKnown RBP eCLIP16■□□□□ 0.15
RFTN1-203ENST00000432519 SLC16A4O15374 487 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 CKAP4Q07065 602 aaKnown RBP16■□□□□ 0.15
RFTN1-203ENST00000432519 CASP8Q14790 479 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 ANO5Q75V66 913 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 ZNF112Q9UJU3 913 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
RFTN1-203ENST00000432519 EVI5O60447 810 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 PEX3P56589 373 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 GABPB1Q06547 395 aaPredicted RBP16■□□□□ 0.15
RFTN1-203ENST00000432519 PHLDB3Q6NSJ2 640 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
RFTN1-203ENST00000432519 RNF10Q8N5U6 811 aaKnown RBP16■□□□□ 0.15
RFTN1-203ENST00000432519 NEK9Q8TD19 979 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 FRMD4BQ9Y2L6 1034 aa16■□□□□ 0.15
RFTN1-203ENST00000432519 TULP1O00294 542 aaPredicted RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 ZNF862O60290 1169 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 PRKCIP41743 596 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 FSTL1Q12841 308 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 BFSP1Q12934 665 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 DRAP1Q14919 205 aaPredicted RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 C1orf220Q5T0J3 134 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 LNX1Q8TBB1 728 aaPredicted RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 MKNK1Q9BUB5 465 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 LARSQ9P2J5 1176 aaKnown RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 DBR1Q9UK59 544 aaKnown RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 DNAJC12Q9UKB3 198 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 PCDHGC5Q9Y5F6 944 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 SSC5DA1L4H1 1573 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 GTPBP10A4D1E9 387 aaKnown RBP15.99■□□□□ 0.15
RFTN1-203ENST00000432519 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 F8VZ95 297 aa15.99■□□□□ 0.15
RFTN1-203ENST00000432519 NR3C2P08235 984 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms