RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 TTC30BQ8N4P2 665 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 SLC26A7Q8TE54 656 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 ATP6V1G3Q96LB4 118 aa12.52□□□□□ -0.41
RIMKLA-202ENST00000431473 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ATP1A1P05023 1023 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 SYDE2Q5VT97 1194 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 STX18Q9P2W9 335 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 SFMBT1Q9UHJ3 866 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 TSR3Q9UJK0 312 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 IFNAR1P17181 557 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 MECOMQ03112 1051 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 DRP2Q13474 957 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 NGRNQ9NPE2 291 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 SUN2Q9UH99 717 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 XDHP47989 1333 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ZNF233A6NK53 670 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ARPP19P56211 112 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 DHX38Q92620 1227 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 DNAJC12Q9UKB3 198 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ATXN7L3BQ96GX2 97 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 BHMT2Q9H2M3 363 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 NEDD4P46934 1319 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 CNGA3Q16281 694 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ARL13BQ3SXY8 428 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 DACH2Q96NX9 599 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 COG4Q9H9E3 785 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 PMS1P54277 932 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ARL6IP4Q66PJ3 421 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 RNF135Q8IUD6 432 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 VPS11Q9H270 941 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 GTPBP10A4D1E9 387 aaKnown RBP12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 BTBD6Q96KE9 485 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 WDR24Q96S15 920 aa12.51□□□□□ -0.41
RIMKLA-202ENST00000431473 RNF103-CHMP3A0A140T963 221 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SUPT3HO75486 399 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SEC24DO94855 1032 aaPredicted RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ZBED8Q8IZ13 594 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ALG13Q9NP73 1137 aaKnown RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 KLHL8Q9P2G9 620 aaPredicted RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 CTIFO43310 598 aaKnown RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 BNIP3LO60238 219 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 LRRC36Q1X8D7 754 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 DPP9Q86TI2 863 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ZNF746Q6NUN9 644 aaPredicted RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SNX19Q92543 992 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 CNOT8Q9UFF9 292 aaKnown RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ARHGAP26Q9UNA1 814 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SAMD9Q5K651 1589 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ADAM22Q9P0K1 906 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 TRAF3IP3Q9Y228 551 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 XPOTO43592 962 aaKnown RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ZRANB2O95218 330 aaKnown RBP eCLIP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 GPC5P78333 572 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 TMEM270Q6UE05 265 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SUGT1Q9Y2Z0 365 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 ALDH18A1P54886 795 aaKnown RBP12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 POU5F1BQ06416 359 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 AP1B1Q10567 949 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 SNX2O60749 519 aa12.5□□□□□ -0.41
RIMKLA-202ENST00000431473 EFTUD2Q15029 972 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 11.1
RIMKLA-202ENST00000431473 KDM1AO60341 852 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 NR3C1P04150 777 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 BMP3P12645 472 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 BRAFP15056 766 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 GCLMP48507 274 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 RAP1GDS1P52306 607 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 ANO4Q32M45 955 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 ZNF564Q8TBZ8 553 aaPredicted RBP12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 SNF8Q96H20 258 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 K7ERI5 159 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 HADHAP40939 763 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 NR1H3Q13133 447 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 RNF139Q8WU17 664 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 IL17RAQ96F46 866 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 POLD4Q9HCU8 107 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 RASSF10A6NK89 507 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 KRT38O76015 456 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 HAUS5O94927 633 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 ZNF507Q8TCN5 953 aa12.49□□□□□ -0.41
RIMKLA-202ENST00000431473 LZTS1Q9Y250 596 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms