RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CEP89Q96ST8 783 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 HSD3B7Q9H2F3 369 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 MRPL44Q9H9J2 332 aaKnown RBP20.14■□□□□ 0.81
HMGN1-206ENST00000431390 A6NJR5 290 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 SFI1A8K8P3 1242 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 PLS3P13797 630 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 PLCB4Q15147 1175 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 DGKDQ16760 1214 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 ODR4Q5SWX8 454 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 EPM2AIP1Q7L775 607 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-206ENST00000431390 EXOC8Q8IYI6 725 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 FIZ1Q96SL8 496 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 FGFBP2Q9BYJ0 223 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 DHX33Q9H6R0 707 aaKnown RBP20.13■□□□□ 0.81
HMGN1-206ENST00000431390 C17orf75Q9HAS0 396 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 FANCLQ9NW38 375 aa20.13■□□□□ 0.81
HMGN1-206ENST00000431390 EIF3DO15371 548 aaKnown RBP eCLIP20.12■□□□□ 0.81
HMGN1-206ENST00000431390 DYNC1LI2O43237 492 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-206ENST00000431390 HBP1O60381 514 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 POLGP54098 1239 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-206ENST00000431390 RTP1P59025 263 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 TRIM32Q13049 653 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 LRRC41Q15345 812 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 BMT2Q1RMZ1 405 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 FAM102BQ5T8I3 360 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 TTI2Q6NXR4 508 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 STXBP4Q6ZWJ1 553 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 FAM178BQ8IXR5 827 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 C7orf61Q8IZ16 206 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 SCFD1Q8WVM8 642 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 C16orf70Q9BSU1 422 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 POLD4Q9HCU8 107 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 XPNPEP1Q9NQW7 623 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 ZNF215Q9UL58 517 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-206ENST00000431390 LAMA3Q16787 3333 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 UBE4BO95155 1302 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 HMGCRP04035 888 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 ZNF18P17022 549 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 MARK3P27448 753 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 LRRC63Q05C16 580 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 ALCAMQ13740 583 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 EMC2Q15006 297 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 TPD52L1Q16890 204 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-206ENST00000431390 MAEAQ7L5Y9 396 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 TRPV1Q8NER1 839 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 SLC7A3Q8WY07 619 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 AP5M1Q9H0R1 490 aa20.12■□□□□ 0.81
HMGN1-206ENST00000431390 COL6A3P12111 3177 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 TRIM49BA6NDI0 452 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 DLL1O00548 723 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 GAS2O43903 313 aaKnown RBP20.11■□□□□ 0.81
HMGN1-206ENST00000431390 DUSP11O75319 330 aaKnown RBP20.11■□□□□ 0.81
HMGN1-206ENST00000431390 GCNT3O95395 438 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 CPT1AP50416 773 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 CASP5P51878 434 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 PMS1P54277 932 aaKnown RBP20.11■□□□□ 0.81
HMGN1-206ENST00000431390 PLCB2Q00722 1185 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 ZNF720Q7Z2F6 126 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 ZNF507Q8TCN5 953 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 NOC3LQ8WTT2 800 aaKnown RBP20.11■□□□□ 0.81
HMGN1-206ENST00000431390 SEMA6BQ9H3T3 888 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 ZMYND8Q9ULU4 1186 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-206ENST00000431390 TRPC6Q9Y210 931 aa20.11■□□□□ 0.81
HMGN1-206ENST00000431390 AP5Z1O43299 807 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 MAFO75444 373 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-206ENST00000431390 MYBP10242 640 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 BRDTQ58F21 947 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-206ENST00000431390 CDKAL1Q5VV42 579 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 ANKRD40Q6AI12 368 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 ANKLE1Q8NAG6 615 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 TSG101Q99816 390 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 GDF15Q99988 308 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 JPH2Q9BR39 696 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-206ENST00000431390 ST6GALNAC4Q9H4F1 302 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 GPRC5CQ9NQ84 441 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 KCNG1Q9UIX4 513 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 PCDHB13Q9Y5F0 798 aa20.1■□□□□ 0.81
HMGN1-206ENST00000431390 COL1A2P08123 1366 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 ZBTB42B2RXF5 422 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 H3BRB1 525 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 SEPT4O43236 478 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 ZNF286BP0CG31 522 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 NMT1P30419 496 aaKnown RBP20.09■□□□□ 0.81
HMGN1-206ENST00000431390 CACNB2Q08289 660 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-206ENST00000431390 ZCWPW2Q504Y3 356 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 ZNF484Q5JVG2 852 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 SPIRE2Q8WWL2 714 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 DUSP9Q99956 384 aaKnown RBP20.09■□□□□ 0.81
HMGN1-206ENST00000431390 STRA6Q9BX79 667 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 KCTD10Q9H3F6 313 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 THAP9Q9H5L6 903 aa20.09■□□□□ 0.81
HMGN1-206ENST00000431390 TUT1Q9H6E5 874 aaKnown RBP20.09■□□□□ 0.81
HMGN1-206ENST00000431390 HMX1Q9NP08 348 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-206ENST00000431390 SAMSN1Q9NSI8 373 aaKnown RBP20.09■□□□□ 0.81
HMGN1-206ENST00000431390 PPP1R37O75864 691 aa20.08■□□□□ 0.81
HMGN1-206ENST00000431390 SMTNP53814 917 aa20.08■□□□□ 0.81
HMGN1-206ENST00000431390 NCKAP1LP55160 1127 aa20.08■□□□□ 0.81
HMGN1-206ENST00000431390 TBC1D8BQ0IIM8 1120 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms