RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 FAM107AO95990 144 aa13.62□□□□□ -0.23
CPNE4-201ENST00000429747 EDRF1Q3B7T1 1238 aa13.62□□□□□ -0.23
CPNE4-201ENST00000429747 FAM47EQ6ZV65 393 aa13.62□□□□□ -0.23
CPNE4-201ENST00000429747 COA1Q9GZY4 146 aa13.62□□□□□ -0.23
CPNE4-201ENST00000429747 CHORDC1Q9UHD1 332 aaPredicted RBP13.62□□□□□ -0.23
CPNE4-201ENST00000429747 MST1RQ04912 1400 aa13.62□□□□□ -0.23
CPNE4-201ENST00000429747 ESYT2A0FGR8 921 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 CYP11B2P19099 503 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 DMP1Q13316 513 aaPredicted RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 ZC2HC1CQ53FD0 456 aaPredicted RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 ANKRD20A3Q5VUR7 823 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 CCDC137Q6PK04 289 aaKnown RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 CCDC89Q8N998 374 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 GLG1Q92896 1179 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 MAK16Q9BXY0 300 aaKnown RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 RAB20Q9NX57 234 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 GCKP35557 465 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 LIG4P49917 911 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 IL9RQ01113 521 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 TRPC3Q13507 836 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 SH2D3AQ9BRG2 576 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 TMEM206Q9H813 350 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 PPIP5K2O43314 1243 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 PEX3P56589 373 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 KDM7AQ6ZMT4 941 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 LRRC8CQ8TDW0 803 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 SYN2Q92777 582 aaPredicted RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 ANAPC7Q9UJX3 599 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 H0YIN7 160 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 APTXQ7Z2E3 356 aaKnown RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 KCNK18Q7Z418 384 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 CTAGE3PQ8IX95 158 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 TNFRSF25Q93038 417 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 SEC16BQ96JE7 1060 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 BLOC1S4Q9NUP1 217 aa13.61□□□□□ -0.23
CPNE4-201ENST00000429747 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
CPNE4-201ENST00000429747 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 TSNAXIP1Q2TAA8 658 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 LRIG3Q6UXM1 1119 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 ARHGEF18Q6ZSZ5 1173 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 SRRM1Q8IYB3 904 aaKnown RBP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 BFSP1Q12934 665 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 TPCN2Q8NHX9 752 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 DCAF4Q8WV16 495 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 RSPH10B2B2RC85 870 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 RSPH10BP0C881 870 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 TROVE2P10155 538 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 CHN1P15882 459 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 CRKP46108 304 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 CASP4P49662 377 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 PPP4CP60510 307 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 PALM2Q8IXS6 379 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 ANKRD35Q8N283 1001 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 RAB3IPQ96QF0 476 aaPredicted RBP13.6□□□□□ -0.23
CPNE4-201ENST00000429747 SIK3Q9Y2K2 1263 aa13.6□□□□□ -0.23
CPNE4-201ENST00000429747 ABCB11O95342 1321 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 FAM187AA6NFU0 413 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 CHRNA3P32297 505 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 RASSF2P50749 326 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 PADI6Q6TGC4 694 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 RNF207Q6ZRF8 634 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
CPNE4-201ENST00000429747 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 LARGE2Q8N3Y3 721 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 CAVIN3Q969G5 261 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 ATRNO75882 1429 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 MED24O75448 989 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 EYA4O95677 639 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 FMO5P49326 533 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 BYSLQ13895 437 aaKnown RBP13.59□□□□□ -0.23
CPNE4-201ENST00000429747 AOC3Q16853 763 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 PPP1R21Q6ZMI0 780 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 XXYLT1Q8NBI6 393 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 SCFD1Q8WVM8 642 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 VTI1AQ96AJ9 217 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 EXOC1LA0A1B0GW35 172 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 KCNJ1P48048 391 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 ZNF449Q6P9G9 518 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 ZNF564Q8TBZ8 553 aaPredicted RBP13.59□□□□□ -0.23
CPNE4-201ENST00000429747 P3H4Q92791 437 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 CALR3Q96L12 384 aaKnown RBP13.59□□□□□ -0.23
CPNE4-201ENST00000429747 XPO6Q96QU8 1125 aaKnown RBP13.59□□□□□ -0.23
CPNE4-201ENST00000429747 NUP85Q9BW27 656 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
CPNE4-201ENST00000429747 PCDHB4Q9Y5E5 795 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms