RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 NRIP1P48552 1158 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 ZP2Q05996 745 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 DRP2Q13474 957 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 MOXD1Q6UVY6 613 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 FAM43BQ6ZT52 329 aaPredicted RBP19.22■□□□□ 0.67
TRIM39-209ENST00000428728 RBM23Q86U06 439 aaKnown RBP19.22■□□□□ 0.67
TRIM39-209ENST00000428728 COLGALT1Q8NBJ5 622 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 RNF169Q8NCN4 708 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 NLRP7Q8WX94 980 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 MBOAT7Q96N66 472 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 C11orf16Q9NQ32 467 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 AAASQ9NRG9 546 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 TYW1Q9NV66 732 aaKnown RBP19.22■□□□□ 0.67
TRIM39-209ENST00000428728 STK36Q9NRP7 1315 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 CCDC194A0A1B0GVG4 234 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 PI4K2BG5E9Z4 385 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 MBTPS2O43462 519 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 CSDE1O75534 798 aaKnown RBP19.21■□□□□ 0.67
TRIM39-209ENST00000428728 FGF18O76093 207 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 DARSP14868 501 aaKnown RBP19.21■□□□□ 0.67
TRIM39-209ENST00000428728 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
TRIM39-209ENST00000428728 TARBP2Q15633 366 aaKnown RBP19.21■□□□□ 0.67
TRIM39-209ENST00000428728 XKR3Q5GH77 459 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 B3GNT9Q6UX72 402 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 FAM177A1Q8N128 213 aaPredicted RBP19.21■□□□□ 0.67
TRIM39-209ENST00000428728 PHF20Q9BVI0 1012 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 ELAC1Q9H777 363 aaKnown RBP19.21■□□□□ 0.67
TRIM39-209ENST00000428728 GJB4Q9NTQ9 266 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 CD207Q9UJ71 328 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 TPCN1Q9ULQ1 816 aa19.21■□□□□ 0.67
TRIM39-209ENST00000428728 FAM189BP81408 668 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 ADAM15Q13444 863 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 SMAD4Q13485 552 aaKnown RBP19.2■□□□□ 0.66
TRIM39-209ENST00000428728 ECHDC2Q86YB7 292 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 ADHFE1Q8IWW8 467 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 ABI1Q8IZP0 508 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 MICAL1Q8TDZ2 1067 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 TMEM117Q9H0C3 514 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 CWH43Q9H720 699 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 TLR9Q9NR96 1032 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 RNF19AQ9NV58 838 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 PRKAG3Q9UGI9 489 aa19.2■□□□□ 0.66
TRIM39-209ENST00000428728 DDX11L8A8MPP1 907 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 HOXA2O43364 376 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 PFKFB2O60825 505 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 STBD1O95210 358 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 XBP1P17861 261 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 LAG3P18627 525 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 UBE3AQ05086 875 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 SMAD2Q15796 467 aaKnown RBP19.19■□□□□ 0.66
TRIM39-209ENST00000428728 PLA2G4FQ68DD2 849 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 PIK3AP1Q6ZUJ8 805 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 NEK8Q86SG6 692 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 ZNF710Q8N1W2 664 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 LRRC43Q8N309 656 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 EFHBQ8N7U6 833 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 OXER1Q8TDS5 423 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 CASD1Q96PB1 797 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 NIFKQ9BYG3 293 aaKnown RBP19.19■□□□□ 0.66
TRIM39-209ENST00000428728 BARX2Q9UMQ3 279 aaPredicted RBP19.19■□□□□ 0.66
TRIM39-209ENST00000428728 C5orf42Q9H799 3197 aa19.19■□□□□ 0.66
TRIM39-209ENST00000428728 EML1O00423 815 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 GPR37L1O60883 481 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 GLP2RO95838 553 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 PBX3P40426 434 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 CLLU1OSQ5K130 101 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 PLPP4Q5VZY2 271 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 CEP89Q96ST8 783 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 TLE6Q9H808 572 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 ORC3Q9UBD5 711 aaPredicted RBP19.18■□□□□ 0.66
TRIM39-209ENST00000428728 VAV3Q9UKW4 847 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 HCN4Q9Y3Q4 1203 aa19.18■□□□□ 0.66
TRIM39-209ENST00000428728 A0A087WZ62 844 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 PER2O15055 1255 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
TRIM39-209ENST00000428728 DNM2P50570 870 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 AK2P54819 239 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 ERVFC1P60507 584 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 PSMC5P62195 406 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 PPP2R5CQ13362 524 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 CSPP1Q1MSJ5 1256 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 LRRC55Q6ZSA7 311 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 RHPN2Q8IUC4 686 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 MSLNLQ96KJ4 702 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 NLRP4Q96MN2 994 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 FDXACB1Q9BRP7 624 aaPredicted RBP19.17■□□□□ 0.66
TRIM39-209ENST00000428728 GCOM2Q9BZD3 368 aaPredicted RBP19.17■□□□□ 0.66
TRIM39-209ENST00000428728 KCNMB3Q9NPA1 279 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 CLEC1BQ9P126 229 aa19.17■□□□□ 0.66
TRIM39-209ENST00000428728 IGKV6-21A0A0C4DH24 114 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 FAM205CA6NFA0 338 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 C19orf67A6NJJ6 358 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 LARGE1O95461 756 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 CTDNEP1O95476 244 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 GCFC2P16383 781 aaKnown RBP19.16■□□□□ 0.66
TRIM39-209ENST00000428728 ATF7P17544 494 aaPredicted RBP19.16■□□□□ 0.66
TRIM39-209ENST00000428728 ANAPC15P60006 121 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 RBM10P98175 930 aaKnown RBP19.16■□□□□ 0.66
TRIM39-209ENST00000428728 KCNT2Q6UVM3 1135 aa19.16■□□□□ 0.66
TRIM39-209ENST00000428728 ANO5Q75V66 913 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms