RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TBC1D10AQ9BXI6 508 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 PPP1R12CQ9BZL4 782 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 TRIM31Q9BZY9 425 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 MIS12Q9H081 205 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 PARP2Q9UGN5 583 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 RASAL2Q9UJF2 1139 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 GSG1L2A8MUP6 293 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 TMCC1O94876 653 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 PLEKHA8P1O95397 391 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 YARSP54577 528 aaKnown RBP17.36■□□□□ 0.37
C9orf3-206ENST00000428313 INHBCP55103 352 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 AMPD3Q01432 767 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 DEUP1Q05D60 604 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 LRRC14Q15048 493 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 ASIC2Q16515 512 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 KIAA1755Q5JYT7 1200 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 VSTM1Q6UX27 236 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 TTC8Q8TAM2 541 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 MKL1Q969V6 931 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 PPP1R14BQ96C90 147 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 MAGEB18Q96M61 343 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 DENND2DQ9H6A0 471 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-206ENST00000428313 MTRF1LQ9UGC7 380 aaKnown RBP17.36■□□□□ 0.37
C9orf3-206ENST00000428313 DLEC1Q9Y238 1755 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 TNKSO95271 1327 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 PITPNM2Q9BZ72 1349 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 A0A0A6YYK5 440 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 hCG_1642624A0A1W2PR95 340 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 H0Y3Z8 333 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 NPEPPSP55786 919 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 CLUL1Q15846 466 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 LRRC55Q6ZSA7 311 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 TMTC3Q6ZXV5 915 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 LRRC15Q8TF66 581 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 HES6Q96HZ4 224 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 RUNDC3BQ96NL0 473 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 TGS1Q96RS0 853 aaKnown RBP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 NACAP1Q9BZK3 213 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 CNTNAP5Q8WYK1 1306 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 PP2D1A8MPX8 630 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 LAD1O00515 517 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 KIAA0391O15091 583 aaKnown RBP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 RIPK2O43353 540 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 GNAT2P19087 354 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 PLTPP55058 493 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 RASIP1Q5U651 963 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 SNX30Q5VWJ9 437 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 CATIPQ7Z7H3 387 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 CCNJLQ8IV13 435 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 KIAA0825Q8IV33 1275 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 GUF1Q8N442 669 aaKnown RBP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 LSM14BQ9BX40 385 aaKnown RBP17.35■□□□□ 0.37
C9orf3-206ENST00000428313 SEMA4AQ9H3S1 761 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■■■□ 21.1
C9orf3-206ENST00000428313 DOCK2Q92608 1830 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
C9orf3-206ENST00000428313 FLT1P17948 1338 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-206ENST00000428313 MBD4O95243 580 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 ANXA13P27216 316 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 POLR2FP61218 127 aaKnown RBP17.34■□□□□ 0.37
C9orf3-206ENST00000428313 RNASELQ05823 741 aaKnown RBP17.34■□□□□ 0.37
C9orf3-206ENST00000428313 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 CCDC6Q16204 474 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 ZC3H18Q86VM9 953 aaKnown RBP17.34■□□□□ 0.37
C9orf3-206ENST00000428313 FBXO25Q8TCJ0 367 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 MGARPQ8TDB4 240 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 SCG3Q8WXD2 468 aaKnown RBP17.34■□□□□ 0.37
C9orf3-206ENST00000428313 SLC7A6OSQ96CW6 309 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-206ENST00000428313 AK8Q96MA6 479 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 IL1RAPL1Q9NZN1 696 aa17.34■□□□□ 0.37
C9orf3-206ENST00000428313 HNRNPCL1O60812 293 aaKnown RBP17.33■□□□□ 0.37
C9orf3-206ENST00000428313 GCP02774 474 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 RARGP13631 454 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 PLCG1P19174 1290 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 CALML3P27482 149 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 Q4G0T1 1027 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 NT5DC3Q86UY8 548 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 ARHGEF2Q92974 986 aaKnown RBP17.33■□□□□ 0.37
C9orf3-206ENST00000428313 ERP27Q96DN0 273 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 SERPINB12Q96P63 405 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 CENPKQ9BS16 269 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 GOLPH3Q9H4A6 298 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 METTL14Q9HCE5 456 aaKnown RBP17.33■□□□□ 0.37
C9orf3-206ENST00000428313 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.37
C9orf3-206ENST00000428313 BZW2Q9Y6E2 419 aaKnown RBP17.33■□□□□ 0.37
C9orf3-206ENST00000428313 USH1CQ9Y6N9 552 aa17.33■□□□□ 0.37
C9orf3-206ENST00000428313 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-206ENST00000428313 ENTPD5O75356 428 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 DCTN3O75935 186 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 FGGP02679 453 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 MARK3P27448 753 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 SLCO1A2P46721 670 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 JAMLQ86YT9 394 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 PROM2Q8N271 834 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms