RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DARSP14868 501 aaKnown RBP10.22□□□□□ -0.77
SMC1A-203ENST00000428014 YWHABP31946 246 aaKnown RBP10.22□□□□□ -0.77
SMC1A-203ENST00000428014 GPC3P51654 580 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 TAP1Q03518 808 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 PAK2Q13177 524 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 UGCGQ16739 394 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 TMEM266Q2M3C6 531 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 TTC38Q5R3I4 469 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 PPP2R2DQ66LE6 453 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 SLC24A5Q71RS6 500 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 SRGAP1Q7Z6B7 1085 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 CMTR2Q8IYT2 770 aaKnown RBP10.22□□□□□ -0.77
SMC1A-203ENST00000428014 C4orf32Q8N8J7 132 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 IGSF22Q8N9C0 903 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 KCNN1Q92952 543 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 P2RX5Q93086 422 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 TGS1Q96RS0 853 aaKnown RBP10.22□□□□□ -0.77
SMC1A-203ENST00000428014 AGO3Q9H9G7 860 aaKnown RBP10.22□□□□□ -0.77
SMC1A-203ENST00000428014 RGS18Q9NS28 235 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 DACT1Q9NYF0 836 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 YBX2Q9Y2T7 364 aaKnown RBP10.22□□□□□ -0.77
SMC1A-203ENST00000428014 PTPRSQ13332 1948 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 PHLPP2Q6ZVD8 1323 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 ZMYM2Q9UBW7 1377 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 GBF1Q92538 1859 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 LOXHD1Q8IVV2 1947 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 NCOR1O75376 2440 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 EOMESO95936 686 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 CA3P07451 260 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 CTSHP09668 335 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 SCP2P22307 547 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 AXLP30530 894 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 SARSP49591 514 aaKnown RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 IGBP1P78318 339 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 DEFB103AP81534 67 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 DSC3Q14574 896 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 MCPH1Q8NEM0 835 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 PSPC1Q8WXF1 523 aaKnown RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 AK8Q96MA6 479 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 NACC1Q96RE7 527 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 EIF2AK1Q9BQI3 630 aaKnown RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 GCOM2Q9BZD3 368 aaPredicted RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 FAM49AQ9H0Q0 323 aaPredicted RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 LMAN2LQ9H0V9 348 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.77
SMC1A-203ENST00000428014 TMEM161AQ9NX61 479 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 SMC3Q9UQE7 1217 aa10.21□□□□□ -0.77
SMC1A-203ENST00000428014 RALGAPA2Q2PPJ7 1873 aa10.21□□□□□ -0.78
SMC1A-203ENST00000428014 CDH23Q9H251 3354 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 FSD2A1L4K1 749 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 LINC01553A4QN01 128 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 C9IYK1 514 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 CHMP2AO43633 222 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 ZNF623O75123 536 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 DGKIO75912 1065 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
SMC1A-203ENST00000428014 SFPQP23246 707 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMC1A-203ENST00000428014 GJB2P29033 226 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 PBX2P40425 430 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 RARRES1P49788 294 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 RAB27AP51159 221 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
SMC1A-203ENST00000428014 ATP2C1P98194 919 aaPredicted RBP10.2□□□□□ -0.78
SMC1A-203ENST00000428014 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 TCTN1Q2MV58 587 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 HYIQ5T013 277 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 Q7L0L9 218 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 MYOCDQ8IZQ8 938 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 METTL13Q8N6R0 699 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 PPP1R13LQ8WUF5 828 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 TRAPPC12Q8WVT3 735 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 CCDC51Q96ER9 411 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 TIPINQ9BVW5 301 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 NKX2-4Q9H2Z4 354 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 C17orf75Q9HAS0 396 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 KCND2Q9NZV8 630 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 STK39Q9UEW8 545 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 SEPT9Q9UHD8 586 aaPredicted RBP10.2□□□□□ -0.78
SMC1A-203ENST00000428014 COL6A3P12111 3177 aa10.2□□□□□ -0.78
SMC1A-203ENST00000428014 ADGRA3Q8IWK6 1321 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 A0A0U1RQF3 1178 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 DDX11L8A8MPP1 907 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 GRXCR1A8MXD5 290 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 H3BQV1 296 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 K7ELQ4 463 aaPredicted RBP10.19□□□□□ -0.78
SMC1A-203ENST00000428014 NCK2O43639 380 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 SPATA31C1P0DKV0 1188 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 FOSL2P15408 326 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 CD52P31358 61 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 TXKP42681 527 aa10.19□□□□□ -0.78
SMC1A-203ENST00000428014 TOB1P50616 345 aaPredicted RBP10.19□□□□□ -0.78
SMC1A-203ENST00000428014 POLGP54098 1239 aaPredicted RBP10.19□□□□□ -0.78
SMC1A-203ENST00000428014 LARP1BQ659C4 914 aaKnown RBP10.19□□□□□ -0.78
SMC1A-203ENST00000428014 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMC1A-203ENST00000428014 FAM228AQ86W67 206 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms