RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 SUCLA2Q9P2R7 463 aaPredicted RBP23.95■■□□□ 1.42
RPUSD3-205ENST00000427174 RCOR1Q9UKL0 485 aa23.95■■□□□ 1.42
RPUSD3-205ENST00000427174 SPECC1Q5M775 1068 aa23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 PADI6Q6TGC4 694 aa23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 TMEM143Q96AN5 459 aa23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 CHAMP1Q96JM3 812 aa23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 RNPC3Q96LT9 517 aaKnown RBP23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 CFAP45Q9UL16 551 aa23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 DNM3Q9UQ16 869 aa23.94■■□□□ 1.42
RPUSD3-205ENST00000427174 USO1O60763 962 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 BAIAP3O94812 1187 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 ACTN1P12814 892 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 ARL2P36404 184 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 CDC42EP1Q00587 391 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 LRIT3Q3SXY7 679 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 AXDND1Q5T1B0 1012 aaPredicted RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 TCP11Q8WWU5 503 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 PRPF31Q8WWY3 499 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 SYMPKQ92797 1274 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 CCDC43Q96MW1 224 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 PPP1R16BQ96T49 567 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 OSMRQ99650 979 aa23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 IFIH1Q9BYX4 1025 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 NOC2LQ9Y3T9 749 aaKnown RBP23.93■■□□□ 1.42
RPUSD3-205ENST00000427174 ARHGEF35A5YM69 484 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 CYP11B2P19099 503 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 CD52P31358 61 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 KARSQ15046 597 aaKnown RBP23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 HABP4Q5JVS0 413 aaKnown RBP23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 ZNF410Q86VK4 478 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 RHPN2Q8IUC4 686 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 KSR1Q8IVT5 923 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 KCNG4Q8TDN1 519 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 PSPC1Q8WXF1 523 aaKnown RBP23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 SEPT8Q92599 483 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 APBB2Q92870 758 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 PLIN2Q99541 437 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 BLOC1S4Q9NUP1 217 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 ATP6V1DQ9Y5K8 247 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 COL4A3BPQ9Y5P4 624 aa23.92■■□□□ 1.42
RPUSD3-205ENST00000427174 ABHD14A-ACY1A0A1B0GW23 586 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 ZRSR1Q15695 479 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 MCPH1Q8NEM0 835 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 CALML4Q96GE6 196 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 ZNF668Q96K58 619 aaPredicted RBP23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 IFT122Q9HBG6 1241 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 ERVK-5Q9HDB9 667 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 TSHZ2Q9NRE2 1034 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 PADI3Q9ULW8 664 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 GINS2Q9Y248 185 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 CHD9Q3L8U1 2897 aa23.91■■□□□ 1.42
RPUSD3-205ENST00000427174 SZT2Q5T011 3432 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 A0A087WZ62 844 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 ASAP2O43150 1006 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 CUTAO60888 179 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 DARSP14868 501 aaKnown RBP23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 PLCG1P19174 1290 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 EIF4BP23588 611 aaKnown RBP23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 SLC12A3P55017 1021 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 LAMTOR4Q0VGL1 99 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 IKBKEQ14164 716 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 FAM228AQ86W67 206 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 SYT2Q8N9I0 419 aaPredicted RBP23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 ASAP3Q8TDY4 903 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 CDK5RAP3Q96JB5 506 aa23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 FDXACB1Q9BRP7 624 aaPredicted RBP23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 CIZ1Q9ULV3 898 aaPredicted RBP23.9■■□□□ 1.42
RPUSD3-205ENST00000427174 EFCAB14O75071 495 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 RPS6KA5O75582 802 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 GLRA2P23416 452 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 WDR5P61964 334 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 KRT85P78386 507 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 MXD4Q14582 209 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 RINT1Q6NUQ1 792 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 C1orf186Q6ZWK4 172 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 LEO1Q8WVC0 666 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 MTIF3Q9H2K0 278 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 TMX1Q9H3N1 280 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 GPRC5CQ9NQ84 441 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 PCDHA7Q9UN72 937 aa23.89■■□□□ 1.41
RPUSD3-205ENST00000427174 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 POU5F1BQ06416 359 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 PAK2Q13177 524 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 NAALADL2Q58DX5 795 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 FAM109BQ6ICB4 259 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 SHC4Q6S5L8 630 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 FAM43BQ6ZT52 329 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 NLRP7Q8WX94 980 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 LINC01599Q8WXQ3 324 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 RUSC1Q9BVN2 902 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 POLR3FQ9H1D9 316 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 ST3GAL5Q9UNP4 418 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 RBM19Q9Y4C8 960 aaKnown RBP23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 SLC4A7Q9Y6M7 1214 aa23.88■■□□□ 1.41
RPUSD3-205ENST00000427174 A0A087X0B3 334 aa23.87■■□□□ 1.41
RPUSD3-205ENST00000427174 PLA2G4BP0C869 781 aa23.87■■□□□ 1.41
RPUSD3-205ENST00000427174 CAPSQ13938 189 aa23.87■■□□□ 1.41
RPUSD3-205ENST00000427174 RTN4RL1Q86UN2 441 aaPredicted RBP23.87■■□□□ 1.41
RPUSD3-205ENST00000427174 IFNLR1Q8IU57 520 aaPredicted RBP23.87■■□□□ 1.41
RPUSD3-205ENST00000427174 DAW1Q8N136 415 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms