RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PHF20L1A8MW92 1017 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 RBAK-RBAKDNI3L0D1 243 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 MYCLP12524 364 aaPredicted RBP14.55□□□□□ -0.08
USP42-203ENST00000426246 CYP11B2P19099 503 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 STAT1P42224 750 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 KCNJ1P48048 391 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 ZNF280AP59817 542 aaPredicted RBP14.55□□□□□ -0.08
USP42-203ENST00000426246 FBXO11Q86XK2 927 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 PPM1KQ8N3J5 372 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 ANKRD42Q8N9B4 389 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 CABS1Q96KC9 395 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 RUSC1Q9BVN2 902 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 SBF1O95248 1867 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 CCDC169A6NNP5 214 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 F5H6K3 240 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 AFPP02771 609 aaKnown RBP14.55□□□□□ -0.08
USP42-203ENST00000426246 KLRC3Q07444 240 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 LRRC14Q15048 493 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 LRRC55Q6ZSA7 311 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 HS2ST1Q7LGA3 356 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 FAM178BQ8IXR5 827 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 BAP1Q92560 729 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 JPH2Q9BR39 696 aaPredicted RBP14.55□□□□□ -0.08
USP42-203ENST00000426246 TBK1Q9UHD2 729 aa14.55□□□□□ -0.08
USP42-203ENST00000426246 PRPHP41219 470 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 ECE1P42892 770 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 GCLMP48507 274 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 MAGOHP61326 146 aaKnown RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 TMEM179Q6ZVK1 233 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 TADA2BQ86TJ2 420 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 MAGOHBQ96A72 148 aaKnown RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 KCNK9Q9NPC2 374 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 CEP72Q9P209 647 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 GRID2IPA4D2P6 1211 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 FZD9O00144 591 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 FLOT1O75955 427 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 NR3C1P04150 777 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 RDXP35241 583 aaKnown RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 MAP3K10Q02779 954 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 PNMA8AQ86V59 439 aaPredicted RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 FAM186BQ8IYM0 893 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 OGFOD1Q8N543 542 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 TBC1D31Q96DN5 1066 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 DYDC2Q96IM9 177 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 NOC2LQ9Y3T9 749 aaKnown RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 GSTTP1A0A1W2PQM5 241 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 FOXO6A8MYZ6 492 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 SPOPO43791 374 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 EDIL3O43854 480 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 TUBB4BP68371 445 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 ZKSCAN8Q15776 578 aaPredicted RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 SLC18A3Q16572 532 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 CIAPIN1Q6FI81 312 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 GBP6Q6ZN66 633 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 LRRC27Q9C0I9 530 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 PLCB1Q9NQ66 1216 aa14.54□□□□□ -0.08
USP42-203ENST00000426246 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
USP42-203ENST00000426246 A0A1W2PRG0 241 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 GAS7O60861 476 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 MAGEA9P43362 315 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 METTL13Q8N6R0 699 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 MYOZ2Q9NPC6 264 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.53□□□□□ -0.08
USP42-203ENST00000426246 PVALEFA0A1B0GWK0 134 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 DCDC2CA8MYV0 355 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 DLATP10515 647 aaKnown RBP14.53□□□□□ -0.08
USP42-203ENST00000426246 KRT5P13647 590 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 NF2P35240 595 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 FAM83AQ86UY5 434 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 UBE2TQ9NPD8 197 aaPredicted RBP14.53□□□□□ -0.08
USP42-203ENST00000426246 RIC8AQ9NPQ8 531 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 USTQ9Y2C2 406 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 NR2E1Q9Y466 385 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 ESYT2A0FGR8 921 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 ZNF233A6NK53 670 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 LRCH2Q5VUJ6 765 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 LMBRD2Q68DH5 695 aaPredicted RBP14.53□□□□□ -0.08
USP42-203ENST00000426246 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 CCDC121Q6ZUS5 278 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 KIRREL3Q8IZU9 778 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 GMCL1P1Q8NEA9 526 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 MTMR9Q96QG7 549 aa14.53□□□□□ -0.08
USP42-203ENST00000426246 GOLGA8KD6RF30 607 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 FAM86B1E9PN63 330 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 GALCP54803 685 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 CCDC105Q8IYK2 499 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 DNAJC19Q96DA6 116 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 DNAJC12Q9UKB3 198 aa14.52□□□□□ -0.08
USP42-203ENST00000426246 AJAP1Q9UKB5 411 aaPredicted RBP14.52□□□□□ -0.08
USP42-203ENST00000426246 TBC1D12O60347 775 aa14.52□□□□□ -0.09
USP42-203ENST00000426246 NOL4O94818 638 aa14.52□□□□□ -0.09
USP42-203ENST00000426246 MYL1P05976 194 aa14.52□□□□□ -0.09
USP42-203ENST00000426246 ERVK-9P63128 1117 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms