RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 FAF2Q96CS3 445 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 NCAPGQ9BPX3 1015 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 OSBPL5Q9H0X9 879 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-207ENST00000426142 RGL1Q9NZL6 768 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 LMCD1Q9NZU5 365 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 TLK1Q9UKI8 766 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 PPME1Q9Y570 386 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 HEY1Q9Y5J3 304 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 GOLGA8MH3BSY2 632 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 HIP1RO75146 1068 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 ACSL3O95573 720 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 SOX5P35711 763 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 SMAD1Q15797 465 aaKnown RBP8.5□□□□□ -1.05
CTNND1-207ENST00000426142 NEDD1Q8NHV4 660 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 AFG1LQ8WV93 481 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 HPS3Q969F9 1004 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 FAM217BQ9NTX9 383 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-207ENST00000426142 CEP72Q9P209 647 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 CAMSAP1Q5T5Y3 1602 aa8.5□□□□□ -1.05
CTNND1-207ENST00000426142 MT-ND3P03897 115 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 TRIM49P0CI25 452 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 TRIM49CP0CI26 452 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SFNP31947 248 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 CCT5P48643 541 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PSMC5P62195 406 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 ITPK1Q13572 414 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF579Q8NAF0 562 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 BEST2Q8NFU1 509 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 CDC26Q8NHZ8 85 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PDCD6IPQ8WUM4 868 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SPZ1Q9BXG8 430 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PCSK1NQ9UHG2 260 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SCINQ9Y6U3 715 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 WDR19Q8NEZ3 1342 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 EXOC1LA0A1B0GW35 172 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PSMD14O00487 310 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 ORC4O43929 436 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 CLTAP09496 248 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 FMR1NBQ8N0W7 255 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 MED4Q9NPJ6 270 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 ABHD10Q9NUJ1 306 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SLC9A2Q9UBY0 812 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 HERC5Q9UII4 1024 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 UBE4BO95155 1302 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PIK3R2O00459 728 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SART1O43290 800 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PMLP29590 882 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 LIG3P49916 1009 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 FOXD4Q12950 439 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SLMAPQ14BN4 828 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 MFSD14CQ5VZR4 134 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF34Q8IZ26 560 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 INTS2Q9H0H0 1204 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 MYO3AQ8NEV4 1616 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 LGALS16A8MUM7 142 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 TSPY1Q01534 308 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 PARD6BQ9BYG5 372 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 NOC2LQ9Y3T9 749 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 TXNP10599 105 aaKnown RBP8.49□□□□□ -1.05
CTNND1-207ENST00000426142 CIITAP33076 1130 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 NME3Q13232 169 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 DBN1Q16643 649 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 URGCPQ8TCY9 931 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 SPON1Q9HCB6 807 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 BCAP29Q9UHQ4 241 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 MOSPD1Q9UJG1 213 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 NFU1Q9UMS0 254 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 USP31Q70CQ4 1352 aa8.49□□□□□ -1.05
CTNND1-207ENST00000426142 TNPO2O14787 897 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF609O15014 1411 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NMT1P30419 496 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 YWHABP31946 246 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 CCDC38Q502W7 563 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 STRIP1Q5VSL9 837 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 SHC4Q6S5L8 630 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 PYROXD1Q8WU10 500 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NUDCD1Q96RS6 583 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 CRAMP1Q96RY5 1269 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 MRPL4Q9BYD3 311 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF70Q9UC06 446 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 ARHGEF40Q8TER5 1519 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NCK2O43639 380 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 GNA15P30679 374 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 RHOT2Q8IXI1 618 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 SPDYE1Q8NFV5 336 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.48□□□□□ -1.055e-6■■■□□ 16.7
CTNND1-207ENST00000426142 RNF25Q96BH1 459 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 LRGUKQ96M69 825 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NUP85Q9BW27 656 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 MTMR4Q9NYA4 1195 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NOVA2Q9UNW9 492 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 MOCS2O96007 188 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms