RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 ZBTB38Q8NAP3 1195 aaPredicted RBP4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 ZSWIM2Q8NEG5 633 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 ASB11Q8WXH4 323 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 IER2Q9BTL4 223 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 TDRD3Q9H7E2 651 aaKnown RBP4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 ARHGEF4Q9NR80 690 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 SEMA3GQ9NS98 782 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 PRR13Q9NZ81 148 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 PCDHA11Q9Y5I1 949 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 BDP1A6H8Y1 2624 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 DNAH12Q6ZR08 3092 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 MGAMO43451 1857 aa4.28□□□□□ -1.72
CNKSR3-201ENST00000424998 TCF20Q9UGU0 1960 aaKnown RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 ARAP2Q8WZ64 1704 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 REV3LO60673 3130 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 ASMTLO95671 621 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SRFP11831 508 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 IFNGR1P15260 489 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 VAV1P15498 845 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SEPHS1P49903 392 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 CCT4P50991 539 aaKnown RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 RBM5P52756 815 aaKnown RBP eCLIP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 PRKCQQ04759 706 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SCRN1Q12765 414 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 GRB10Q13322 594 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 ARHGEF6Q15052 776 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SHHQ15465 462 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SF1Q15637 639 aaKnown RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SUPT20HL1Q3ZLR7 823 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 HSP90AB3PQ58FF7 597 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 FAM209AQ5JX71 171 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 FOXB2Q5VYV0 432 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 NSMFQ6X4W1 530 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 MIGA2Q7L4E1 593 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 TMPRSS7Q7RTY8 843 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 APPBP2Q92624 585 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 MRGPRX3Q96LB0 322 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 WRNIP1Q96S55 665 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 UHRF1Q96T88 793 aaPredicted RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 EPHX3Q9H6B9 360 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 C11orf49Q9H6J7 331 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 GREM2Q9H772 168 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 CARS2Q9HA77 564 aaKnown RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 BSDC1Q9NW68 430 aaPredicted RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 ZNF70Q9UC06 446 aaPredicted RBP4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 TSPYL4Q9UJ04 414 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 SLC5A6Q9Y289 635 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 DOCK3Q8IZD9 2030 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 LTBP2Q14767 1821 aa4.27□□□□□ -1.73
CNKSR3-201ENST00000424998 NCOR1O75376 2440 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 MYO3BQ8WXR4 1341 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 TRBV23-1A0A0A0MS06 115 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 C2orf71A6NGG8 1288 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 TAF5LO75529 589 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 CETPP11597 493 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 PABPC1P11940 636 aaKnown RBP4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 HOXC12P31275 282 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 PRMT2P55345 433 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 SNAPC2Q13487 334 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 SQSTM1Q13501 440 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 C21orf62-AS1Q17RA5 79 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 PRSS53Q2L4Q9 553 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 FAM109BQ6ICB4 259 aaPredicted RBP4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 ZPBP2Q6X784 338 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 ZNF574Q6ZN55 896 aaPredicted RBP4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 KSR1Q8IVT5 923 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 STK11IPQ8N1F8 1099 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 FLCNQ8NFG4 579 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 KCTD13Q8WZ19 329 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 FCRL3Q96P31 734 aaPredicted RBP4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 MYD88Q99836 296 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 LRFN3Q9BTN0 628 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 COA1Q9GZY4 146 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 SLKQ9H2G2 1235 aaPredicted RBP4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 NKX2-4Q9H2Z4 354 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 CD209Q9NNX6 404 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 GPRC5CQ9NQ84 441 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 AP5S1Q9NUS5 200 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 VAV3Q9UKW4 847 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 RNF112Q9ULX5 631 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 BACE2Q9Y5Z0 518 aa4.26□□□□□ -1.73
CNKSR3-201ENST00000424998 MAST2Q6P0Q8 1798 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 BLACEA4D250 179 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 TNPO2O14787 897 aaKnown RBP4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 AURKAO14965 403 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 CPP00450 1065 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 ESR1P03372 595 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 CD8BP10966 210 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 HOXD10P28358 340 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 EPHB4P54760 987 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 TFF2Q03403 129 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 ZP2Q05996 745 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 PPIL2Q13356 520 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 MSMPQ1L6U9 139 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 GAB4Q2WGN9 574 aa4.25□□□□□ -1.73
CNKSR3-201ENST00000424998 CCDC152Q4G0S7 254 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms