RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 HAS1Q92839 578 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 GBP4Q96PP9 640 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 USP28Q96RU2 1077 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 SEZ6LQ9BYH1 1024 aa7.89□□□□□ -1.15
EPHA4-206ENST00000424339 TTC12Q9H892 705 aaPredicted RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 NOP53Q9NZM5 478 aaKnown RBP7.89□□□□□ -1.15
EPHA4-206ENST00000424339 EMSYQ7Z589 1322 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 A6NJR5 290 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 SPTLC2O15270 562 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 DHX15O43143 795 aaKnown RBP7.88□□□□□ -1.15
EPHA4-206ENST00000424339 CABYRO75952 493 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 PSAPP07602 524 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 CCL5P13501 91 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 TXLNAP40222 546 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 CHRNA4P43681 627 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 ARHGAP1Q07960 439 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 ITGB3BPQ13352 177 aaPredicted RBP7.88□□□□□ -1.15
EPHA4-206ENST00000424339 PTPAQ15257 358 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 FSCN1Q16658 493 aaKnown RBP7.88□□□□□ -1.15
EPHA4-206ENST00000424339 DGKDQ16760 1214 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 LY6KQ17RY6 165 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 PRAMEF19Q5SWL8 479 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 MIS18BP1Q6P0N0 1132 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 B3GNT9Q6UX72 402 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 C4orf32Q8N8J7 132 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 TRPV1Q8NER1 839 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 OR6J1Q8NGC5 347 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 SH3TC2Q8TF17 1288 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 ATP6V0A1Q93050 837 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 SPATA32Q96LK8 384 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 SPATA33Q96N06 139 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 PYM1Q9BRP8 204 aaKnown RBP7.88□□□□□ -1.15
EPHA4-206ENST00000424339 KATNAL1Q9BW62 490 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 MCOLN1Q9GZU1 580 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 RNF208Q9H0X6 261 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 PDGFCQ9NRA1 345 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 RCOR1Q9UKL0 485 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 ZNF215Q9UL58 517 aaPredicted RBP7.88□□□□□ -1.15
EPHA4-206ENST00000424339 PCDHA10Q9Y5I2 948 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 SRPRBQ9Y5M8 271 aaKnown RBP7.88□□□□□ -1.15
EPHA4-206ENST00000424339 TCHHQ07283 1943 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 LOXHD1Q8IVV2 1947 aa7.88□□□□□ -1.15
EPHA4-206ENST00000424339 FRMPD3Q5JV73 1810 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 SYNRGQ9UMZ2 1314 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 FSD2A1L4K1 749 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 KBTBD13C9JR72 458 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 GOLGA6L22H0YM25 854 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 DNM1LO00429 736 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 CUTAO60888 179 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 ATP9AO75110 1047 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 ADAMTS4O75173 837 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 ATG7O95352 703 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 ARIH2O95376 493 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 C6orf222P0C671 652 aaPredicted RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 BMP4P12644 408 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 NCLP19338 710 aaKnown RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 CCND3P30281 292 aaPredicted RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 TXKP42681 527 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 ACTR2P61160 394 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 SP2Q02086 613 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 DNM1Q05193 864 aaKnown RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 SPIRE1Q08AE8 756 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 EPHA7Q15375 998 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 FAM160B1Q5W0V3 765 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 KRT79Q5XKE5 535 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 FAM173BQ6P4H8 233 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 PLPPR4Q7Z2D5 763 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 MIER3Q7Z3K6 550 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 AFAP1L1Q8TED9 768 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 FOXD4L4Q8WXT5 416 aaPredicted RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 BTBD6Q96KE9 485 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 FAM167AQ96KS9 214 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 GPR20Q99678 358 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 NT5C3AQ9H0P0 336 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 TMEM60Q9H2L4 133 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 SMARCAD1Q9H4L7 1026 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 AZI2Q9H6S1 392 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 GPAMQ9HCL2 828 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 TUFT1Q9NNX1 390 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 DISC1Q9NRI5 854 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 LRWD1Q9UFC0 647 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 VAV3Q9UKW4 847 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 OGDHLQ9ULD0 1010 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 SAMM50Q9Y512 469 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 CLIC4Q9Y696 253 aa7.87□□□□□ -1.15
EPHA4-206ENST00000424339 MYH9P35579 1960 aaKnown RBP7.87□□□□□ -1.15
EPHA4-206ENST00000424339 IGKV6D-21A0A0A0MT36 114 aa7.86□□□□□ -1.15
EPHA4-206ENST00000424339 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.86□□□□□ -1.15
EPHA4-206ENST00000424339 GOLGA6L4A6NEF3 574 aa7.86□□□□□ -1.15
EPHA4-206ENST00000424339 LGR5O75473 907 aa7.86□□□□□ -1.15
EPHA4-206ENST00000424339 SGPL1O95470 568 aa7.86□□□□□ -1.15
EPHA4-206ENST00000424339 RPLP2P05387 115 aaKnown RBP7.86□□□□□ -1.15
EPHA4-206ENST00000424339 P4HBP07237 508 aaKnown RBP7.86□□□□□ -1.15
EPHA4-206ENST00000424339 MMP3P08254 477 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms