RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 KIAA2012Q0VF49 1180 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 PKN2Q16513 984 aaKnown RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 TBC1D10BQ4KMP7 808 aaPredicted RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 UBXN11Q5T124 520 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 SLC4A10Q6U841 1118 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 HHIPL2Q6UWX4 724 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 PPFIBP1Q86W92 1011 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 ANKRD18AQ8IVF6 992 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 LINS1Q8NG48 757 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 DNAAF4Q8WXU2 420 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 CDC5LQ99459 802 aaKnown RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 NT5C1AQ9BXI3 368 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 RTFDC1Q9BY42 306 aaPredicted RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
LINC00458-201ENST00000423442 PMF1-BGLAPU3KQ54 211 aa7.06□□□□□ -1.28
LINC00458-201ENST00000423442 ABCC4O15439 1325 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 TAF1P21675 1872 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 PMS1P54277 932 aaKnown RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 NOL9Q5SY16 702 aaKnown RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 ZFYVE27Q5T4F4 411 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 INTS3Q68E01 1043 aaKnown RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 UBE3BQ7Z3V4 1068 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 RASAL3Q86YV0 1011 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 DCPSQ96C86 337 aaKnown RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 FCRL3Q96P31 734 aaPredicted RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 MPHOSPH8Q99549 860 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 SRRTQ9BXP5 876 aaKnown RBP7.05□□□□□ -1.28
LINC00458-201ENST00000423442 RXFP1Q9HBX9 757 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 USP40Q9NVE5 1235 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 FAM86C1Q9NVL1 165 aa7.05□□□□□ -1.28
LINC00458-201ENST00000423442 MKI67P46013 3256 aaKnown RBP7.04□□□□□ -1.28
LINC00458-201ENST00000423442 IGHMBP2P38935 993 aaKnown RBP7.04□□□□□ -1.28
LINC00458-201ENST00000423442 GCKRQ14397 625 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 PUM1Q14671 1186 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC00458-201ENST00000423442 TAF7LQ5H9L4 462 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 FBXO46Q6PJ61 603 aaPredicted RBP7.04□□□□□ -1.28
LINC00458-201ENST00000423442 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 G2E3Q7L622 706 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 DPF2Q92785 391 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 CDCA5Q96FF9 252 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 GZF1Q9H116 711 aaPredicted RBP7.04□□□□□ -1.28
LINC00458-201ENST00000423442 BCAS3Q9H6U6 928 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 GP6Q9HCN6 339 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 HDAC5Q9UQL6 1122 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
LINC00458-201ENST00000423442 ASTN2O75129 1339 aaPredicted RBP7.03□□□□□ -1.28
LINC00458-201ENST00000423442 LAMB2P55268 1798 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 K7ESM1 405 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 PSMD14O00487 310 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 TP53P04637 393 aaPredicted RBP7.03□□□□□ -1.28
LINC00458-201ENST00000423442 IFNGR1P15260 489 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 DLX2Q07687 328 aaPredicted RBP7.03□□□□□ -1.28
LINC00458-201ENST00000423442 IFIT5Q13325 482 aaKnown RBP7.03□□□□□ -1.28
LINC00458-201ENST00000423442 FIBCD1Q8N539 461 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 TTLL11Q8NHH1 800 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 CELF1Q92879 486 aaKnown RBP7.03□□□□□ -1.28
LINC00458-201ENST00000423442 PTCHD1Q96NR3 888 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 DBR1Q9UK59 544 aaKnown RBP7.03□□□□□ -1.28
LINC00458-201ENST00000423442 DUSP10Q9Y6W6 482 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 MYH3P11055 1940 aa7.03□□□□□ -1.28
LINC00458-201ENST00000423442 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 SH3D21A4FU49 640 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 ALDH1L1O75891 902 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 IGKV5-2P06315 115 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 ASGR2P07307 311 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 NOP2P46087 812 aaKnown RBP7.02□□□□□ -1.29
LINC00458-201ENST00000423442 KCNJ4P48050 445 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 GPSM2P81274 684 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 SLFN5Q08AF3 891 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
LINC00458-201ENST00000423442 CCDC57Q2TAC2 916 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 ANKRD39Q53RE8 183 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 MOB2Q70IA6 237 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 KIAA0825Q8IV33 1275 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 DDX1Q92499 740 aaKnown RBP7.02□□□□□ -1.29
LINC00458-201ENST00000423442 SPON2Q9BUD6 331 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 ANKRD2Q9GZV1 360 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 RNF38Q9H0F5 515 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 DBNDD1Q9H9R9 158 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 GGA3Q9NZ52 723 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 ZNF451Q9Y4E5 1061 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 FHOD1Q9Y613 1164 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 DUOX1Q9NRD9 1551 aa7.02□□□□□ -1.29
LINC00458-201ENST00000423442 PAPPA2Q9BXP8 1791 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 UBE2Q2LH0YL09 131 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 IPO8O15397 1037 aaKnown RBP7.01□□□□□ -1.29
LINC00458-201ENST00000423442 UFL1O94874 794 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 CD3EP07766 207 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 CT47B1P0C2W7 299 aaPredicted RBP7.01□□□□□ -1.29
LINC00458-201ENST00000423442 NCAM1P13591 858 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 CD247P20963 164 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 TM4SF4P48230 202 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
LINC00458-201ENST00000423442 ALDH1L2Q3SY69 923 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 TBC1D16Q8TBP0 767 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 ALG3Q92685 438 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 GPR20Q99678 358 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 R3HDMLQ9H3Y0 253 aa7.01□□□□□ -1.29
LINC00458-201ENST00000423442 NOL6Q9H6R4 1146 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms