RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TYW1Q9NV66 732 aaKnown RBP20.82■□□□□ 0.92
SREBF1-206ENST00000423161 SEPT9Q9UHD8 586 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-206ENST00000423161 PCDHGC5Q9Y5F6 944 aa20.82■□□□□ 0.92
SREBF1-206ENST00000423161 FGF18O76093 207 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 ALADP13716 330 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 ZSCAN20P17040 1043 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-206ENST00000423161 NRIP1P48552 1158 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 UBE3AQ05086 875 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 MTERF2Q49AM1 385 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 KRT25Q7Z3Z0 450 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 RBM23Q86U06 439 aaKnown RBP20.81■□□□□ 0.92
SREBF1-206ENST00000423161 THNSL1Q8IYQ7 743 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 EFHBQ8N7U6 833 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 ETNPPLQ8TBG4 499 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 MBOAT7Q96N66 472 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 TLR9Q9NR96 1032 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 HCN4Q9Y3Q4 1203 aa20.81■□□□□ 0.92
SREBF1-206ENST00000423161 C19orf67A6NJJ6 358 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 HOXA2O43364 376 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 DARSP14868 501 aaKnown RBP20.8■□□□□ 0.92
SREBF1-206ENST00000423161 LAG3P18627 525 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 TARBP2Q15633 366 aaKnown RBP20.8■□□□□ 0.92
SREBF1-206ENST00000423161 CSPP1Q1MSJ5 1256 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 INF2Q27J81 1249 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 XKR3Q5GH77 459 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 B3GNT9Q6UX72 402 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 MICAL1Q8TDZ2 1067 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 NLRP7Q8WX94 980 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 MSLNLQ96KJ4 702 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 TMEM117Q9H0C3 514 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 CWH43Q9H720 699 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 DDX25Q9UHL0 483 aaKnown RBP20.8■□□□□ 0.92
SREBF1-206ENST00000423161 KCNJ14Q9UNX9 436 aa20.8■□□□□ 0.92
SREBF1-206ENST00000423161 TMEM150BA6NC51 233 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 CDKL5O76039 1030 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 NEFLP07196 543 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 FGFR4P22455 802 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 PLA2G5P39877 138 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 ECHDC2Q86YB7 292 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 ABI1Q8IZP0 508 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 CASD1Q96PB1 797 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 POP1Q99575 1024 aaKnown RBP20.79■□□□□ 0.92
SREBF1-206ENST00000423161 NIFKQ9BYG3 293 aaKnown RBP20.79■□□□□ 0.92
SREBF1-206ENST00000423161 RNF19AQ9NV58 838 aa20.79■□□□□ 0.92
SREBF1-206ENST00000423161 DCXO43602 365 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 GLP2RO95838 553 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 SCRN1Q12765 414 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 DRP2Q13474 957 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 LETM2Q2VYF4 491 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 RNF169Q8NCN4 708 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 FAM122AQ96E09 287 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 SH2D3AQ9BRG2 576 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 PHF20Q9BVI0 1012 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 SLKQ9H2G2 1235 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-206ENST00000423161 TLE6Q9H808 572 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 CLEC1BQ9P126 229 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 BARX2Q9UMQ3 279 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-206ENST00000423161 ARID2Q68CP9 1835 aa20.78■□□□□ 0.92
SREBF1-206ENST00000423161 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 SLC37A4O43826 429 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 STBD1O95210 358 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 EYA4O95677 639 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 ERVFC1P60507 584 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 LRRC55Q6ZSA7 311 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 LRRC43Q8N309 656 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 SMRP1Q8NCR6 262 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 CEP89Q96ST8 783 aa20.77■□□□□ 0.92
SREBF1-206ENST00000423161 STK36Q9NRP7 1315 aa20.77■□□□□ 0.91
SREBF1-206ENST00000423161 DDX11L8A8MPP1 907 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 PRR33A8MZF0 331 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 PER2O15055 1255 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 CSDE1O75534 798 aaKnown RBP20.76■□□□□ 0.91
SREBF1-206ENST00000423161 XBP1P17861 261 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 DNM2P50570 870 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 CDC42EP1Q00587 391 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 PDE12Q6L8Q7 609 aaKnown RBP20.76■□□□□ 0.91
SREBF1-206ENST00000423161 NEK8Q86SG6 692 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 MRPS27Q92552 414 aaKnown RBP20.76■□□□□ 0.91
SREBF1-206ENST00000423161 GCOM2Q9BZD3 368 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-206ENST00000423161 LZTS1Q9Y250 596 aa20.76■□□□□ 0.91
SREBF1-206ENST00000423161 IGKV6-21A0A0C4DH24 114 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 A0A0U1RQF3 1178 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 FSD2A1L4K1 749 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 FSCN2O14926 492 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 PSMC5P62195 406 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 PLCB3Q01970 1234 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 COASYQ13057 564 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 KCNT2Q6UVM3 1135 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 ZNF558Q96NG5 402 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 CDCA3Q99618 268 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-206ENST00000423161 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 TPCN1Q9ULQ1 816 aa20.75■□□□□ 0.91
SREBF1-206ENST00000423161 A0A087WZ62 844 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 EML1O00423 815 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PFKFB2O60825 505 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 DTNBO60941 627 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 MAFO75444 373 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 EOMESO95936 686 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 GCFC2P16383 781 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms