RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 MAPK7Q13164 816 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 BFSP2Q13515 415 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 SNW1Q13573 536 aaKnown RBP18.86■□□□□ 0.61
COL7A1-202ENST00000422991 LONRF3Q496Y0 759 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 IER5Q5VY09 327 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 RSPH3Q86UC2 560 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 CEP57L1Q8IYX8 460 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 NME8Q8N427 588 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 TIPINQ9BVW5 301 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 POLR3FQ9H1D9 316 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-202ENST00000422991 GPRC5CQ9NQ84 441 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 PRDM5Q9NQX1 630 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-202ENST00000422991 SUCLA2Q9P2R7 463 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-202ENST00000422991 AKT3Q9Y243 479 aa18.86■□□□□ 0.61
COL7A1-202ENST00000422991 UMODL1Q5DID0 1318 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 NPHP3-ACAD11A0A0J9YXS1 232 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 MYMKA6NI61 221 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 ZNF202O95125 648 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 VTNP04004 478 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 ARL2P36404 184 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 MRPS6P82932 125 aaKnown RBP18.85■□□□□ 0.61
COL7A1-202ENST00000422991 FAM102BQ5T8I3 360 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 TRAF7Q6Q0C0 670 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 CHRDL2Q6WN34 429 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 MAEAQ7L5Y9 396 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 DAW1Q8N136 415 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 PSPC1Q8WXF1 523 aaKnown RBP18.85■□□□□ 0.61
COL7A1-202ENST00000422991 TRIM43Q96BQ3 446 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-202ENST00000422991 REEP2Q9BRK0 252 aa18.85■□□□□ 0.61
COL7A1-202ENST00000422991 RANBP2P49792 3224 aaKnown RBP18.85■□□□□ 0.61
COL7A1-202ENST00000422991 HIP1RO75146 1068 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 NR1I2O75469 434 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 CTSHP09668 335 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 SELPP16109 830 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 MGAT3Q09327 533 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 RAD51AP2Q09MP3 1159 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 TMEM62Q0P6H9 643 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 FAM26DQ5JW98 314 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 ZNF618Q5T7W0 954 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 KRBA2Q6ZNG9 492 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 ASAP3Q8TDY4 903 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 PRPF31Q8WWY3 499 aaKnown RBP18.84■□□□□ 0.61
COL7A1-202ENST00000422991 STAMQ92783 540 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 KIFAP3Q92845 792 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 DRC1Q96MC2 740 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 PPP1R12CQ9BZL4 782 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 WNT8AQ9H1J5 351 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 SCN5AQ14524 2016 aa18.84■□□□□ 0.61
COL7A1-202ENST00000422991 GPR32O75388 356 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 KRT18P05783 430 aaKnown RBP18.83■□□□□ 0.6
COL7A1-202ENST00000422991 GLRA2P23416 452 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 ITGB8P26012 769 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 GPC3P51654 580 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 LAMTOR4Q0VGL1 99 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 GIT2Q14161 759 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 MXD4Q14582 209 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-202ENST00000422991 LRRC8DQ7L1W4 858 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 RHPN2Q8IUC4 686 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 GRAMD1CQ8IYS0 662 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 ZNF710Q8N1W2 664 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 DDX12PQ92771 950 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 PAGE5Q96GU1 130 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 PPP1R16BQ96T49 567 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 LRRC27Q9C0I9 530 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 ADAMTS10Q9H324 1103 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 POLD4Q9HCU8 107 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 ODF2LQ9ULJ1 636 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 TRPV2Q9Y5S1 764 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 CDY2AQ9Y6F7 541 aa18.83■□□□□ 0.6
COL7A1-202ENST00000422991 RSPH10B2B2RC85 870 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 M0QZ92 97 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 TIMP1P01033 207 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CHRNA1P02708 482 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 RSPH10BP0C881 870 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CYP2C18P33260 490 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 MCM4P33991 863 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 NLRP11P59045 1033 aaKnown RBP18.82■□□□□ 0.6
COL7A1-202ENST00000422991 AMPD3Q01432 767 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CAPSQ13938 189 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 KIZQ2M2Z5 673 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CNNM4Q6P4Q7 775 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 KSR1Q8IVT5 923 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CNNM3Q8NE01 707 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 BSNDQ8WZ55 320 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 DNAJC19Q96DA6 116 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 TIGD1Q96MW7 591 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 CELF4Q9BZC1 486 aaKnown RBP18.82■□□□□ 0.6
COL7A1-202ENST00000422991 TRIM9Q9C026 710 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 PRO3102Q9H379 93 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 PRKAG2Q9UGJ0 569 aa18.82■□□□□ 0.6
COL7A1-202ENST00000422991 ZMYND8Q9ULU4 1186 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-202ENST00000422991 ASAP2O43150 1006 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 KINO60870 393 aaKnown RBP18.81■□□□□ 0.6
COL7A1-202ENST00000422991 TBCAO75347 108 aaKnown RBP18.81■□□□□ 0.6
COL7A1-202ENST00000422991 RAG1P15918 1043 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 AFMP43652 599 aa18.81■□□□□ 0.6
COL7A1-202ENST00000422991 ZNF131P52739 623 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms