RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 PLEKHG6Q3KR16 790 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 LRIT3Q3SXY7 679 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 TRIM61Q5EBN2 209 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 LETMD1Q6P1Q0 360 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 SEZ6L2Q6UXD5 910 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 MIGA2Q7L4E1 593 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 PRRT2Q7Z6L0 340 aaPredicted RBP5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 WDR63Q8IWG1 891 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 ARHGEF39Q8N4T4 335 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 ANKRD44Q8N8A2 993 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 BVESQ8NE79 360 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 RNF141Q8WVD5 230 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 EZH1Q92800 747 aaPredicted RBP5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 UTP4Q969X6 686 aaKnown RBP5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 FBXL18Q96ME1 805 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 CLUHP3Q96NS8 147 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 ASPNQ9BXN1 380 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 IRF2BPLQ9H1B7 796 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 GP6Q9HCN6 339 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 INTS7Q9NVH2 962 aaKnown RBP5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 PRR13Q9NZ81 148 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 TMOD2Q9NZR1 351 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 KLHL42Q9P2K6 505 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 GABRQQ9UN88 632 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 EMC9Q9Y3B6 208 aa5.73□□□□□ -1.49
CDC42EP3-202ENST00000422687 RFX7Q2KHR2 1363 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 SCO2A0A1W2PP80 73 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 GSG1L2A8MUP6 293 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 TBX1O43435 398 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 PPM1BO75688 479 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 NBPF7P0C2Y1 421 aaPredicted RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 C6orf222P0C671 652 aaPredicted RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CYP2C8P10632 490 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 PABPC1P11940 636 aaKnown RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 GRIA2P42262 883 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 FLT3LGP49771 235 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 SUMO1P63165 101 aaKnown RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 EXOSC9Q06265 439 aaKnown RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 NFIAQ12857 509 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 LRRC24Q50LG9 513 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CAVIN4Q5BKX8 364 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CDC42EP5Q6NZY7 148 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 RNF180Q86T96 592 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 TRIM59Q8IWR1 403 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 DHX37Q8IY37 1157 aaKnown RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 LRRN4CLQ8ND94 238 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 WDR66Q8TBY9 1149 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CDC6Q99741 560 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 LGR4Q9BXB1 951 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 MKRN2Q9H000 416 aaKnown RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 SEMA6CQ9H3T2 930 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CWC22Q9HCG8 908 aaKnown RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 ZFP64Q9NPA5 681 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 C9orf78Q9NZ63 289 aaPredicted RBP5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 STOML1Q9UBI4 398 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 STAP2Q9UGK3 403 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 STXBP5LQ9Y2K9 1186 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 DAGLAQ9Y4D2 1042 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 AFG3L2Q9Y4W6 797 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 CACNA1FO60840 1977 aa5.72□□□□□ -1.49
CDC42EP3-202ENST00000422687 ENTPD3O75355 529 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 IGLV1-40P01703 118 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 MYCLP1P12525 358 aaPredicted RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 ITGA4P13612 1032 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 RFX5P48382 616 aaPredicted RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 PUM3Q15397 648 aaKnown RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 CCDC184Q52MB2 194 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 METTL24Q5JXM2 366 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 CDPF1Q6NVV7 123 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 FASTKD5Q7L8L6 764 aaKnown RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZFPM1Q8IX07 1006 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 FAM20CQ8IXL6 584 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 SCYL3Q8IZE3 742 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 RIN3Q8TB24 985 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 CHAC2Q8WUX2 184 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 MIPEPQ99797 713 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 IDI2Q9BXS1 227 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 FAM126AQ9BYI3 521 aaPredicted RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 BICC1Q9H694 974 aaKnown RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 C7orf69Q9H7B7 122 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 CAAP1Q9H8G2 361 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 SSU72Q9NP77 194 aaKnown RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 LRP2BPQ9P2M1 347 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 CGGBP1Q9UFW8 167 aaPredicted RBP5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 FHOD1Q9Y613 1164 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 GAKO14976 1311 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 SALL1Q9NSC2 1324 aa5.71□□□□□ -1.5
CDC42EP3-202ENST00000422687 CDH23Q9H251 3354 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 MARCH6O60337 910 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 FRAT2O75474 233 aaPredicted RBP5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 TFRCP02786 760 aaKnown RBP5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 PDGFRBP09619 1106 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 IFIT1P09914 478 aaKnown RBP5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 PRDX5P30044 214 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 ETV3P41162 512 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 ZNF445P59923 1031 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 FAM110CQ1W6H9 321 aa5.7□□□□□ -1.5
CDC42EP3-202ENST00000422687 MAP3K21Q5TCX8 1036 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms